Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq40 120 4e-22 seq5 100 4e-16 >seq40 Length=1419383 Score = 120 bits (132), Expect = 4e-22 Identities = 553/866 (64%), Gaps = 21/866 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 ||||| || | || ||||| ||||| || || |||||| | | |||||||| | Sbjct 1017421 GGAAGAGCAAGCGAAGCCAAGTTGCAGACGGCGACCTCATCAGGAGCAGTGTACTCGATG 1017480 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 ||||| || || | |||||| || ||| || | ||||| ||||| ||||| | Sbjct 1017481 ATTTCAGTGCACAGGTTGGAGCTGCGAATGACACCGAGGTTCTTCTGGTTGCTCTTGCGG 1017540 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| ||||||||||| |||||| |||| | || ||||| ||||| | | ||| ||| Sbjct 1017541 TTGCAGGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCGAGGATA 1017600 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || | ||| | | || || | || || || ||||||||| Sbjct 1017601 GCGTACCACAGCTTCTG-GGCGCGGATGGTGTCGCGACCACGGCCTTCGCGCTCGTACTT 1017659 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-G 111527 ||| || | || ||||| || || | |||||| | ||| || | || || | Sbjct 1017660 CTCGTACAGAACCTCGAACTCGTCGCCGTACACGTCGGCCAAACCAGG-ACATTCACTGG 1017718 Query 111528 GACAGAAAAGAGACCA--TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 | || | |||| ||| | || | | ||| || ||||||||||| || || || || Sbjct 1017719 GGCACATCAGAGTCCAGGTGGAGTTC--TGCTCGACACGCTTCATGAAGAGATCAGGGAT 1017776 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | |||||||| | ||| | || || | ||| ||||| || | Sbjct 1017777 CCAGAGAGCGTAGAAGAGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAG 1017836 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || ||||| | | || || |||||||| ||||| || |||| |||| || Sbjct 1017837 ATCGAGGAAGGCGAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGG 1017896 Query 111700 TCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 | ||| | | ||||| |||| || || | || ||| ||| || || || |||| Sbjct 1017897 ACGCTTGTTGCCGCCC----TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCA 1017952 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 | || | | || | ||| || || || || ||| ||| | |||| | | Sbjct 1017953 TGGGCACGAGGCCGTTGGATGTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAA 1018012 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 || || | ||||| || || || ||| ||||| || || | | | Sbjct 1018013 TGCAGTGAGCGTTGAGACCAATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGA 1018072 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 | || | || || || | |||||||| ||||| | | || | |||||| | | Sbjct 1018073 GGGTGTCGTAAATGCCATCAATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGA 1018132 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT- 111997 || || || || || ||| |||||||||| || | |||||| |||| ||| | Sbjct 1018133 GTTGAGGCTGAGGAGTTCCGGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAA-GTACTTG 1018191 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | ||||| || ||||||||| | | ||| || || || || || ||||| || | Sbjct 1018192 AGTGACATAAGGTTGTATGTCTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACA 1018251 Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083 ||||| ||||||| ||| | ||| || Sbjct 1018252 GCGACACGCATGATCATCTGCTGGGG 1018277 >seq5 Length=936409 Score = 100 bits (110), Expect = 4e-16 Identities = 281/429 (66%), Gaps = 2/429 (0%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| || || | |||||| |||||||||||||| ||| | || ||||| ||||| Sbjct 248653 TAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGCGAGATGTTCTCCATG 248594 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTGAGGAGACGA 122490 ||||| || || || | || | | || || | || | ||| ||||| Sbjct 248593 AAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCGCCGAGGGCGAGGAGCAGACGG 248534 Query 122491 TCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACAT 122550 || | || |||| ||||| | | |||| || | |||||| |||| ||| ||| Sbjct 248533 TCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCGTTCATGCCGAGGAGAGCACAC 248474 Query 122551 GGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGG 122610 ||||| || || | | |||| | | ||| || | || ||||| | | ||| | || Sbjct 248473 GGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACGGCCTCGGTGATGATCTCACGG 248414 Query 122611 ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACTCCTG 122669 | || | || ||| | || | | || | | |||| |||||| || Sbjct 248413 ACGAGCTCAGCAGAGGGCTTGTT-CTTGAGGTGTGAGTGGAGCAGGCAGGCAAAGTCAGT 248355 Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| | |||||| || || || || || || || |||||| ||||| ||||||||||| Sbjct 248354 GTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGACC 248295 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | ||| || || ||||||||||||||||| ||| Sbjct 248294 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGACAGC 248235 Query 122790 CGCAAACGC 122798 ||||| || Sbjct 248234 GGCAAAGGC 248226 Score = 95.1 bits (104), Expect = 2e-14 Identities = 189/273 (69%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGG-TTGATTTTCGCGGGCGATTTCAAAGAG 11688 |||||||||||||| ||||||| ||| || || || | || | ||| | | || || Sbjct 545680 GCATCAATCTCATCGATGAAGATAATGCAGGGCGTGCTCTT-TCTGGCATTCTGGAACAG 545738 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-C 11747 |||||| || ||| ||||| ||||| || |||||||| || || | | || | | Sbjct 545739 ATCGCGTACTCTTGAAGCACCAACACCGACGAACATCTCAACGAACTCAGAACCACTGAC 545798 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 ||| || |||||| ||| || ||||| || | || ||||| || ||||| || | Sbjct 545799 ACT-GAAGAATGGTACACCAGACTCACCAGCAGTTGCCTTTGCGAGCAGAGTCTTACCGG 545857 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA--CTTCCAAAATA 11865 |||| || ||| | ||||| || |||| |||||||| || ||| ||| | | Sbjct 545858 TACCAGGAGGACCAGAGAGAATAGCACCTCTAGGGATCTTTGCGCCAAGCTTTTGGA--A 545915 Query 11866 TCTCTCGGGTTGCTTGAGAAAATCCACAATCTC 11898 | |||||||||||| || || | |||| ||| Sbjct 545916 GCGCTCGGGTTGCTTCAGGAAGTTGACAAACTC 545948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031670283200