Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq40 147 3e-30 seq5 122 1e-22 >seq40 Length=1419383 Score = 147 bits (162), Expect = 3e-30 Identities = 561/869 (65%), Gaps = 25/869 (3%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || | || |||| || || || | | |||||| | |||||||||| || Sbjct 1017421 GGAAGAGCAAGCGAAGCCAAGTTGCAGACGGCGACCTCATCAGGAGCAGTGTACTCGATG 1017480 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| ||||||| ||| || || |||| || | |||||| || || ||| | Sbjct 1017481 ATTTCAGTGCACAGGTTGGAGCTGCGAATGACACCGAGGTTCTTCTGGTTGCTCTTGCGG 1017540 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||| |||||| | || | || ||||| || || | || ||| ||| Sbjct 1017541 TTGCAGGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCGAGGATA 1017600 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || | ||| | | || | || | | ||| || | || || || ||||||||| Sbjct 1017601 GCGTACCACAGCTTCTGG-GCGCGGATGGTGTCGCGACCACGGCCTTCGCGCTCGTACTT 1017659 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATC 118999 ||| || | || ||||| || || |||| || | | || || | || | Sbjct 1017660 CTCGTACAGAACCTCGAACTCGTCGCCGTACACG---TCGGCCAAACCAGGA-CATTCAC 1017715 Query 119000 TGGG-CAGAAGAGAGACCA--TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 119056 |||| || | |||| ||| | || | | ||| || |||||||||||||| || || Sbjct 1017716 TGGGGCACATCAGAGTCCAGGTGGAGTTC--TGCTCGACACGCTTCATGAAGAGATCAGG 1017773 Query 119057 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 119116 ||||||||| || |||||||||| || ||| |||| || | || || || || Sbjct 1017774 GATCCAGAGAGCGTAGAAGAGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCG 1017833 Query 119117 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 119176 | || | ||| | | || || |||||||| || || ||||| | |||| || || Sbjct 1017834 GAGATCGAGGAAGGCGAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACC 1017893 Query 119177 CTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230 | |||| || |||| | || || || |||||| ||| || ||||| || Sbjct 1017894 ---AGGACGCTTGTTGCCGCCCTGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAG 1017950 Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 119290 ||| || | || || | |||| ||| || || || ||| ||| | |||| | Sbjct 1017951 CATGGGCACGAGGCCGTTGGATGTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACG 1018010 Query 119291 GACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 119350 | ||| || | |||||| || ||||| ||| ||||| ||||| | | Sbjct 1018011 AATGCAGTGAGCGTTGAGACCAATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTT 1018070 Query 119351 GAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA 119410 ||| || |||| || ||||| || ||||| |||| | | || | |||||| | Sbjct 1018071 GAGGGTGTCGTAAATGCCATCAATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGC 1018130 Query 119411 CATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACC 119470 | ||||||| || || || || ||||||| || || | ||||| |||| ||| Sbjct 1018131 GAGTTGAGGCTGAGGAGTTCCGGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAA-GTACT 1018189 Query 119471 T-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 119529 | | ||||| || ||| ||||| | | | || || || || || || ||||| | Sbjct 1018190 TGAGTGACATAAGGTTGTATGTCTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAA 1018249 Query 119530 TCGAGACCCGCATAAACATGTATTGGGGT 119558 | ||| ||||| | ||| | |||||| Sbjct 1018250 CAGCGACACGCATGATCATCTGCTGGGGT 1018278 >seq5 Length=936409 Score = 122 bits (134), Expect = 1e-22 Identities = 353/535 (66%), Gaps = 10/535 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| | ||||||||||||||| ||||| || ||| ||| |||||||| Sbjct 248653 TAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGCGAGATGTTCTCCATG 248594 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGACGA 129847 || || || ||||| | | | | || || | || | ||| ||||| Sbjct 248593 AAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCGCCGAGGGCGAGGAGCAGACGG 248534 Query 129848 TCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACAT 129907 || | ||| |||| ||||| | |||| || | |||||| |||| ||| ||| Sbjct 248533 TCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCGTTCATGCCGAGGAGAGCACAC 248474 Query 129908 GGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGA 129967 ||||| || || | | |||| ||| ||| ||| | || || || | ||| | | Sbjct 248473 GGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACGGCCTCGGTGATGATCTCACGG 248414 Query 129968 ATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCT---TGAAG-AGTTCCACGGCAAACTC 130023 | | ||| | ||| || | | | || | || || || || |||||| || Sbjct 248413 ACGAGCTCAGCAG-AGGGCTTGTTCTTGAGGTGTGAGTGGAGCAGG--CA-GGCAAAGTC 248358 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| | |||||||||||| |||||||| || || |||||| ||||| |||||||| Sbjct 248357 AGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAG 248298 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | |||||| || | | || || || ||||||||||| ||||| || Sbjct 248297 ACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGAC 248238 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCA 130202 | || || || | | || |||| || | || | | |||| || | |||||| | Sbjct 248237 AGCGGCAAAGGCGATCAAGCG-GCAGCCAAAGGTCGAGTCCTTGTCGCAGATCCACTTGA 248179 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 ||||| | |||||| ||| ||| || || | | ||| || || | ||||| Sbjct 248178 GGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTCTCAATGGCGTTGAAGAG 248124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434875321520