Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq40 134 4e-26 seq42 114 4e-20 seq38 114 4e-20 seq39 105 2e-17 seq11 95.1 4e-14 >seq40 Length=1419383 Score = 134 bits (148), Expect = 4e-26 Identities = 156/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| ||||| || ||||| || || || Sbjct 110812 CATACCACCACGCAGACGAAGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTC 110871 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || || ||||| ||||| || ||||| ||||| ||||| |||||||| || Sbjct 110872 GCTCAGGGTACGACCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGG 110931 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| || ||||| ||||| || || ||| || || || || || | ||||| | | Sbjct 110932 AGGAATGCCCTCTTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATAGTGTCAGAAGACT 110990 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||| ||||| || | ||||| ||||| Sbjct 110991 CAACCTCAAGAGTGATGGTCTTGCCGGT 111018 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || || || || || || || || || Sbjct 110584 CATACCACCACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTC 110643 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || ||||||||||| || || || || || || Sbjct 110644 GGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGG 110703 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || || | || ||||| || || | || || | || Sbjct 110704 GGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTC 110763 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| |||| ||||| || || || || || || ||||||||||| Sbjct 110764 GACCTCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814 >seq42 Length=1255954 Score = 114 bits (126), Expect = 4e-20 Identities = 439/684 (64%), Gaps = 8/684 (1%) Strand=Plus/Minus Query 349251 ATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTG 349310 |||| || | || || || || || || || |||||| | || || || || | ||||| Sbjct 500426 ATGACCGCATTGAGATTATCGCCAACGACCAGGGTAACCGCACCACTCCCTCGTTCGTTG 500367 Query 349311 CATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATC 349370 | || ||||| || |||||| |||| ||||| || || || || || | ||| || | Sbjct 500366 CCTTCACCGACACCGAGCGTCTGATCGGTGACTCGGCCAAGAACCAGGTCGCTATGAACC 500307 Query 349371 CAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATC 349428 | | || || || || ||||| ||||| || ||||| | | || | || | | Sbjct 500306 CTCACAACACCGTCTTCGATGCCAAGCGTCTCATTGGCCGCAAGTTCGCCGATGCTGAGG 500247 Query 349429 TACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACC 349488 | || | || | || || || || || | || | | | ||| | || || || Sbjct 500246 TTCAGG--CCGACATGAAGCACTTCCCCTTCAAGGTCAT-CGAGAAGGC--TGGCAAGCC 500192 Query 349489 AATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATC 349548 || || |||| || | || ||||| |||| || ||||| || ||||| || Sbjct 500191 CGTTGTTCAGGTCGAGTTCAAGGGTGAGGAAAAGACCTTCACCCCCGAGGAGATTTCCTC 500132 Query 349549 AATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA 349608 ||||| | || ||| || | || || | || | |||| || || | | Sbjct 500131 CATGGTCCTCACCAAGATGCGTGAGACCGCCGAGTCCTACCTTGGTGGCACCGTCAACAA 500072 Query 349609 TGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGC 349668 ||||| | ||||| || ||||| || || || | ||||| || || || ||||| Sbjct 500071 CGCTGTCGTCACTGTCCCTGCCTACTTCAACGACTCTCAGCGCCAGGCTACCAAGGATGC 500012 Query 349669 TGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAAT 349728 || ||||| || | || || || | || || || || || || || || || || Sbjct 500011 CGGTCTGATTGCTGGCCTTAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTGCCAT 499952 Query 349729 TGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788 ||| || || ||||| || | | ||| || || | || || || ||| | || Sbjct 499951 TGCCTACGGTCTTGACAAGAAGGTTGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGG 499892 Query 349789 TGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGC 349848 ||||||||| || ||||| || || || || |||| ||||| || || || || || | Sbjct 499891 TGGTGGTACCTTCGATGTTTCGCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTC 499832 Query 349849 AACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908 ||||| ||||| || || | ||||| || || || || || ||||| || || || Sbjct 499831 TACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTTGTCAACCACTT 499772 Query 349909 TGTTAAAGAATTTAAGCGTCAAGC 349932 || || || || || || ||||| Sbjct 499771 CGTCAATGAGTTCAAACG-CAAGC 499749 >seq38 Length=1749017 Score = 114 bits (126), Expect = 4e-20 Identities = 222/327 (68%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || ||||||||| | || || | || | || || | || || | || ||| |||| Sbjct 454177 AAGATGAAGGAAGTCGCCGAGTCGTACCTTGGCGAGAAGGTCACCAACGCCGTTGTTACC 454118 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || ||||| ||||||||| | || || || ||||| |||| ||| || Sbjct 454117 GTCCCCGCCTACTTCAATGACGCCCAGCGTGCCGCCACCAAGGATGCCGGCACCATCGCC 454058 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | || ||||| | | | || ||||| || ||||| || | || || || || Sbjct 454057 GGCCTCAACGTTCTCCGTGTCGTCAACGAACCTACCGCTGCCGCTCTGGCCTACGGACTC 453998 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || || || | | | ||| | || || | | ||| | ||||||||||| || Sbjct 453997 GACAA---GACCGGCGAGGAACGCCAGATCATTGTCTACGATCTCGGTGGTGGTACCTTC 453941 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 ||||| || | || || | || || || | || || || | || |||||||||||| Sbjct 453940 GATGTCTCCATTCTGACCGTCGACGATGGCGTCTTCGAGGTCCAGGCTACTGCTGGTGAT 453881 Query 349862 ACACATCTTGGTGGAGAAGATTTTGAT 349888 || ||||| ||||| || || |||||| Sbjct 453880 ACCCATCTCGGTGGTGAGGACTTTGAT 453854 >seq39 Length=1607033 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || ||||| |||||||| ||||| || || || || || || Sbjct 1034986 ATACCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 1034927 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || ||||| || ||||| || || ||||| || || Sbjct 1034926 GAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 1034867 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || || ||||| || || | || || || || || | || || | || Sbjct 1034866 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCG 1034807 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || ||||| || | ||||| || || || || || || || Sbjct 1034806 ACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1034766 >seq11 Length=2522318 Score = 95.1 bits (104), Expect = 4e-14 Identities = 100/131 (76%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || ||||||||| | || || ||| ||||| | |||||||| || |||||||| || Sbjct 1514993 CGAGGCACACCAAGAGTGACGTTC---TTAGACGAGACACCAGCGAAATGGAAAGTGTTG 1515049 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||| | |||||| ||||| ||||| || || | || ||||||||||| Sbjct 1515050 AGCGTCATCTGAGTCGCGGGCTCTCCAATCGACTGTGCGGCCAAGACACCAACCATTTCA 1515109 Query 377578 CCAGGATTGAC 377588 |||||| |||| Sbjct 1515110 CCAGGACTGAC 1515120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253584603726