Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq40 199 4e-46 seq5 120 3e-22 >seq40 Length=1419383 Score = 199 bits (220), Expect = 4e-46 Identities = 505/760 (66%), Gaps = 6/760 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| ||||| | |||||||| || || || | | || | |||||| ||| Sbjct 1018264 TCATGCGTGTCGCTGTTGGTATCCATGGCGAGGATATCGAGGCTGCCATTGAGACATACA 1018205 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| | |||||||| || |||||| |||| ||||| |||| || || || Sbjct 1018204 ACCTTATGTCACTCAAGTACTTCACTCACGCCTCGCCCACCCTCTTCAGTGCCGGAACTC 1018145 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||| ||||| | | |||||| || | | |||||||| ||||| || || |||| Sbjct 1018144 CTCAGCCTCAACTCGCTTCATGCTTCTTGATTGATATGAAGGACGACTCAATTGATGGCA 1018085 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || |||||| || ||| ||||||||| | ||||| || ||| || Sbjct 1018084 TTTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGAACGCAGGTGGCATTGGTCTCA 1018025 Query 53433 ACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 || |||| | | ||||| | ||| | || || || |||||| || | Sbjct 1018024 AC-GCTCACTGCATTCGTGCCACTGGCTCTTACATTGCTGGTACCAACGGCACATCCAAC 1017966 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || ||||||| |||||||| || ||||||||||| ||| | |||||| | ||||| || Sbjct 1017965 GGCCTCGTGCCCATGCTCCGTGTTTTCAACAACACTGCCAGATACGTCGATCAGGGCGGC 1017906 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||||| || | |||||||||||||||||||| |||||||||||| | | | Sbjct 1017905 AACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTCGCC 1017846 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TAC 53670 || ||||| || || ||| || ||| | || || | || ||| || || || ||| Sbjct 1017845 TTCCTCGATCTCCGCAAGAACCATGGTAAGGAGGAAGTTCGTGCCCGCGATCTCTTCTAC 1017786 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 ||||| ||||| || || ||||||||| | || ||| || || ||| || Sbjct 1017785 -GCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGCAGAACTCCACCTGGACTCT 1017727 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 ||||||||| | || || || || | | || ||||| || ||||| | | | Sbjct 1017726 GATGTGCCCCAGTGAATGTCCTGGTTTGGCCGACGTGTACGGCGACGAGTTCGAGGTTCT 1017667 Query 53791 GTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 ||| || ||||| || | | ||||| | | || || | || | | Sbjct 1017666 GTACGAGAAGTACG-AGCGCGAAGGCCGTGGTCGCGACACCATCCGCGCCCAGAAGCTGT 1017608 Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909 || | || |||||| || ||| ||||| || | || | |||| ||||||||| Sbjct 1017607 GGTACGCTATCCTCGAGGCTCAGACCGAGACCGGTAACCCCTTCATGCTGTACAAGGATG 1017548 Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCAT 53949 | |||| |||||||||||||||||| |||| ||||| Sbjct 1017547 CCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTGTCAT 1017508 >seq5 Length=936409 Score = 120 bits (132), Expect = 3e-22 Identities = 324/488 (66%), Gaps = 16/488 (3%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || || || | ||| |||||||| || ||||||||||| | ||| ||||||| | | Sbjct 248326 TCGTTGGAGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCG 248267 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC-GCGAA 74908 |||||||| ||||||||| || |||||| |||||||||| | ||| || || || Sbjct 248266 AAGGAACCCGAGAAGAAGATACCCTCGACAGCGGCAAAGGCGATCAAGCG--GCAGCCAA 248209 Query 74909 CGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAG 74964 ||| | ||| ||||| | | ||||| || || |||| |||| ||| Sbjct 248208 AGGTCGAGTCCTTGTCGCAGATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGA-TGCAA 248150 Query 74965 GGACAG-TATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTG 75023 ||| | | || || || | ||||||| | || | || || ||| | || Sbjct 248149 GGAATGTTCTCAATGGCGTTGAAGAGGTAGGTACGCTGCTTAGGTTCGCTGATGTATGTG 248090 Query 75024 TCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAG 75083 || || | | |||||| ||||| || ||||| ||| | | |||| | ||||| Sbjct 248089 TCGATGAGCAATGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAG 248030 Query 75084 AAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCA 75141 || | | ||||| | ||||| || || ||||| || | ||| ||||| Sbjct 248029 AAGCATCTGGCCTCAGGGATCTGGACCTCGGAGCTGAAACGCTC--GACGAGGTTCTCGT 247972 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCAT 75201 ||||||| ||||| ||||| ||||| ||||| || || ||| ||| ||||| | Sbjct 247971 TGACGATACCGTCAGAGGCAGCGAAGAAAGCGAGGACGTGAGAGATGAAGAAACGCTCGT 247912 Query 75202 CGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCG 75258 |||| ||| || ||| ||| || | |||||| | | ||||||||||||| | | Sbjct 247911 CGTCGTTGAGGCGTCTGTTCCAGTCGTGAAGGTCCTTGGAAAGATCAATCTCCTCGGCGG 247852 Query 75259 TCCAGAAA 75266 |||||||| Sbjct 247851 TCCAGAAA 247844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215712711600