Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq40 118 9e-22
seq39 86.0 5e-12
>seq40
Length=1419383
Score = 118 bits (130), Expect = 9e-22
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| | || |||||||| || || | || ||| | || || | |||||
Sbjct 111020 TGACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACGTCAAGA 110961
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| || || |||||||| ||||| || || ||||| |||||| | || | ||| ||||
Sbjct 110960 GCAAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCA 110901
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| ||| | |||||| || ||| | ||| ||||||||||| ||||||||||| | |
Sbjct 110900 AGCAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTCTTC 110841
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| | || | ||| |||| ||||| ||
Sbjct 110840 ACCTTGTCCTTCGTCTGCGTGGTGGTAT 110813
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||||||| | || || || ||||| ||| | |||
Sbjct 110586 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCC 110527
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||| || |||||||| || || || || || || ||
Sbjct 110526 GACACAATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCAG 110467
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || || ||||| || | || | || || ||||||
Sbjct 110466 CAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAAC 110407
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||| ||
Sbjct 110406 ATCCAGAAGGAGTCAAC 110390
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | ||||||||||| || || |||||
Sbjct 110814 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 110755
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| |||||||| || || || |||
Sbjct 110754 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAA 110695
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || ||||| || | || || | || | ||||| ||||||
Sbjct 110694 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAAC 110635
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | || | || | ||| | || ||||| ||
Sbjct 110634 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGTCTTCGTGGTGGTAT 110585
>seq39
Length=1607033
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/234 (68%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
||||| |||| | | || || || || || |||||| | || || ||||| || || |
Sbjct 1034755 CGCCACGCAGCT--TCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTC 1034812
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
|||||| | || || | ||||| || || || ||||| || ||||| || || ||
Sbjct 1034813 CTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 1034872
Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163
|| ||||| | || | |||||| || || | || || | || ||||||| ||
Sbjct 1034873 CCAGCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTA 1034932
Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| || ||||||||||| | || | || | ||| | || ||||| ||
Sbjct 1034933 CAACATCCAGAAGGAGTCGACTCTTCACCTTGTCCTCCGTCTCCGTGGTGGTAT 1034986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918171667840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |