Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq39 178 3e-39 seq40 176 1e-38 seq21 102 2e-16 >seq39 Length=1607033 Score = 178 bits (196), Expect = 3e-39 Identities = 161/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||||||||| ||||| || |||||||| || || | ||| || | ||||| Sbjct 1034968 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 1034909 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || ||||| || |||| || ||||||||| Sbjct 1034908 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 1034849 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| ||| || ||||| || ||||| ||| Sbjct 1034848 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 1034789 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || ||||| || || Sbjct 1034788 TTGCCCGTAAGGGTCTTGACGAA 1034766 >seq40 Length=1419383 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| || ||||| || || |||||||| || || | || || Sbjct 110593 ACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGT 110652 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| || ||||| ||||| |||||||| || |||| || Sbjct 110653 GCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCC 110712 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| || || || ||||||||||| || || ||||| || Sbjct 110713 TTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAG 110772 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || ||||| ||||| || || | |||||| Sbjct 110773 AGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814 Score = 154 bits (170), Expect = 3e-32 Identities = 147/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||||||||| ||||| || || ||||| || || ||||| | || ||| Sbjct 110831 AGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCT 110890 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| ||||||||||| || || || || ||||||| || || |||||| Sbjct 110891 TCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCC 110950 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| |||||||| |||||||| |||||||| ||| Sbjct 110951 TGGATCTTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTC 111010 Query 211083 TTTCCCGT 211090 || || || Sbjct 111011 TTGCCGGT 111018 >seq21 Length=2295224 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||||||| ||| || |||||||| || || | ||||| | ||||| Sbjct 1877140 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1877199 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || ||||| || || | || |||||||| Sbjct 1877200 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1877258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151376231330