Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq40 100 2e-16 >seq40 Length=1419383 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || || || || ||||| || || || || | Sbjct 110814 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 110755 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| ||||| | || ||||| || Sbjct 110754 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCA 110696 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| ||||| || || || || | |||||| | ||| ||||| Sbjct 110695 ACAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAA 110636 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || || || |||||| Sbjct 110635 CATCCAGAAGGAATCCACA 110617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009426981336