Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq40 178 3e-39
seq39 156 9e-33
seq21 111 3e-19
>seq40
Length=1419383
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || | || ||||| || | || || || ||||||||||||||||
Sbjct 110359 ACCGCCACGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGA 110418
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| ||||||||||| | || || ||||| ||||| | || || ||||| ||
Sbjct 110419 GAGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGG 110478
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||||||||||| || ||| | ||||| ||||| || | ||| ||
Sbjct 110479 GATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAAC 110538
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||| ||||| ||||| || |||| |||||| ||||| ||||||||
Sbjct 110539 TTCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| ||| || |||||||||||||| |
Sbjct 110587 ACCACCACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGA 110646
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || |||||||||| || |||||||| ||
Sbjct 110647 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGG 110706
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || |||||||| |||||||| | || || | ||||| ||||| || | |||||
Sbjct 110707 AATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGAC 110766
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || ||||| || || | ||||| ||||| ||||||||
Sbjct 110767 CTCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814
Score = 123 bits (136), Expect = 5e-23
Identities = 153/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| ||||| || || || | || || || || |||||||||||
Sbjct 110815 ACCACCACGCAGACGAAGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCT 110874
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || || || ||||| || || || ||||| | ||| || || || ||
Sbjct 110875 CAGGGTACGACCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGG 110934
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| ||||| ||||| |||||| ||||| || ||| | ||||||||||| |||| || |
Sbjct 110935 AATGCCCTCTTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAA 110993
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077
| || |||||||| ||||| || ||||
Sbjct 110994 CCTCAAGAGTGATGGTCTTGCCGGTCA 111020
>seq39
Length=1607033
Score = 156 bits (172), Expect = 9e-33
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | || || || |||||||||||||| |
Sbjct 1034984 ACCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1034925
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||||| || || ||||| ||
Sbjct 1034924 AAGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 1034865
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | ||||| ||||| || | |||||
Sbjct 1034864 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 1034805
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || ||||| ||||| ||||| | ||||| |||||
Sbjct 1034804 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1034766
>seq21
Length=2295224
Score = 111 bits (122), Expect = 3e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | ||||| || || |||||||||||||| |
Sbjct 1877124 ACCACCACGGAGGCGGAGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 1877183
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || || ||||||| || || ||||| ||
Sbjct 1877184 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGG 1877243
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 1877244 GATACCCTCCTTGTCT 1877259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738636723468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |