Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq40 132 3e-26 seq39 120 2e-22 seq21 95.1 9e-15 >seq40 Length=1419383 Score = 132 bits (146), Expect = 3e-26 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| ||||| ||||||||||| |||| ||| ||| | || || Sbjct 110606 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCA 110665 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||||| || |||| || | |||||||| ||| Sbjct 110666 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 110725 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||||| || || ||||| | ||||| |||| Sbjct 110726 ATCTTGGACTTGACATTGT--CGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCT 110783 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| ||||| || ||||| Sbjct 110784 TGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| | ||||||||| || || |||||| ||||||||||| || | ||| || Sbjct 110369 AGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGG 110428 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| |||||| ||||| ||||| | |||||||| |||| || | ||| ||| Sbjct 110429 CCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCC 110488 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || || ||||| ||| | | | || ||||||| ||||| || || | || Sbjct 110489 TTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAACTTCGAGTGTG 110548 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || || ||||| |||||||| ||||| Sbjct 110549 ATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586 >seq39 Length=1607033 Score = 120 bits (132), Expect = 2e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| |||| || ||| | || || Sbjct 1034965 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 1034906 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| |||||||| || | || | || ||||| ||| Sbjct 1034905 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 1034846 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| ||| || ||||| | || || ||||| Sbjct 1034845 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 1034786 Query 44309 CCCGTGAGGGTCTTCACGAAG 44329 ||||| |||||||| |||||| Sbjct 1034785 CCCGTAAGGGTCTTGACGAAG 1034765 >seq21 Length=2295224 Score = 95.1 bits (104), Expect = 9e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||||||||||| ||||||||||| |||| ||| ||| | || || Sbjct 1877143 ACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1877202 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||| |||||||| || | || | ||| ||||| || ||| Sbjct 1877203 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTGTT 1877262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990215729914