Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq40 132 3e-26
seq39 120 2e-22
seq21 95.1 9e-15
>seq40
Length=1419383
Score = 132 bits (146), Expect = 3e-26
Identities = 157/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| ||||| ||||||||||| |||| ||| ||| | || ||
Sbjct 110606 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCA 110665
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||||| ||||| || |||| || | |||||||| |||
Sbjct 110666 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 110725
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||||| || || ||||| | ||||| ||||
Sbjct 110726 ATCTTGGACTTGACATTGT--CGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCT 110783
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||||||| ||||| || |||||
Sbjct 110784 TGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814
Score = 114 bits (126), Expect = 9e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||| | ||||||||| || || |||||| ||||||||||| || | ||| ||
Sbjct 110369 AGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGG 110428
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || |||| |||||| ||||| ||||| | |||||||| |||| || | ||| |||
Sbjct 110429 CCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCC 110488
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| || ||||| ||| | | | || ||||||| ||||| || || | ||
Sbjct 110489 TTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAACTTCGAGTGTG 110548
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || || || ||||| |||||||| |||||
Sbjct 110549 ATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586
>seq39
Length=1607033
Score = 120 bits (132), Expect = 2e-22
Identities = 147/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| ||||||||||| |||| || ||| | || ||
Sbjct 1034965 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 1034906
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||||| |||||||| || | || | || ||||| |||
Sbjct 1034905 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 1034846
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| ||| || ||||| | || || |||||
Sbjct 1034845 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 1034786
Query 44309 CCCGTGAGGGTCTTCACGAAG 44329
||||| |||||||| ||||||
Sbjct 1034785 CCCGTAAGGGTCTTGACGAAG 1034765
>seq21
Length=2295224
Score = 95.1 bits (104), Expect = 9e-15
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||||||||||| ||||||||||| |||| ||| ||| | || ||
Sbjct 1877143 ACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1877202
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||| |||||||| || | || | ||| ||||| || |||
Sbjct 1877203 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTGTT 1877262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990215729914
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |