Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq39 163 7e-35 seq40 145 2e-29 >seq39 Length=1607033 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || |||||||| ||||| || ||| ||||||||| Sbjct 1034766 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 1034825 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| |||||||| || || || || ||||||||||| || || Sbjct 1034826 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 1034885 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||||||||| |||||||| ||||| | |||||| |||| || ||| |||| || Sbjct 1034886 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAG 1034945 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || || ||||| Sbjct 1034946 GAGTCGACTCTTCACCTTGT 1034965 >seq40 Length=1419383 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||| ||||| || ||| || ||| Sbjct 110583 CAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCCGAC 110524 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| || ||||| || || ||||| || |||||||| Sbjct 110523 ACAATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCAGCAG 110464 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||| | || ||||| | || || | || || ||| || Sbjct 110463 CGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAACATC 110404 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || ||||| ||||| || || | ||||| Sbjct 110403 CAGAAGGAGTCAACTCTGCACCTGGTGCTCAGACT 110369 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || || || || ||||| || || ||| Sbjct 110811 CAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCCGAC 110752 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| ||||| || || || ||||| || Sbjct 110751 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAACAG 110692 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | ||||| |||| || ||| || Sbjct 110691 CGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAACATC 110632 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| ||||| || ||||| Sbjct 110631 CAGAAGGAATCCACACTCCACCTTGT 110606 Score = 118 bits (130), Expect = 3e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || ||||| || ||||| || || ||||| ||||| |||||||| Sbjct 111018 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACGTCAAGAGC 110959 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||||||||| || || |||||||| ||||| || ||||||||||| || || Sbjct 110958 AAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCAAG 110899 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || |||||||| || | || || ||| || ||| | || || || || || || || Sbjct 110898 CAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTCTTCAC 110839 Query 178125 CTTGT 178129 ||||| Sbjct 110838 CTTGT 110834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730552242148