Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq40 147 2e-30
seq39 140 3e-28
seq21 127 2e-24
>seq40
Length=1419383
Score = 147 bits (162), Expect = 2e-30
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || ||| |||||||| ||||| |||||||||
Sbjct 110588 CCACCACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAG 110647
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||| || || ||||||||||||||||| | ||||
Sbjct 110648 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGA 110707
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| || ||| || | || | |||||| |||||| |
Sbjct 110708 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGACGACTCGA 110765
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || || || ||||| ||||||||||||||
Sbjct 110766 CCTCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || ||||||||||||||| ||||||
Sbjct 110816 CCACCACGCAGACGAAGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTC 110875
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| ||||| |||||||| ||||| || || ||||| || |||| |||
Sbjct 110876 AGGGTACGACCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGA 110935
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||| |||||| ||| || ||| ||| | | | |||||| ||||| ||
Sbjct 110936 ATGCCCTCTTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATAGTGTCAGAAGACTCAAC 110994
Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840
||| | || || || || || ||||
Sbjct 110995 CTCAAGAGTGATGGTCTTGCCGGTCA 111020
>seq39
Length=1607033
Score = 140 bits (154), Expect = 3e-28
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || ||||||||| ||||| ||||||||
Sbjct 1034983 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1034924
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || ||||||||||| |||||||| ||||||||||| ||||||| ||||
Sbjct 1034923 AGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 1034864
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | |||||| ||||| ||
Sbjct 1034863 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAGGACTCGAC 1034805
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853
||| | || || || || ||||| || ||||| |||||
Sbjct 1034804 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1034766
>seq21
Length=2295224
Score = 127 bits (140), Expect = 2e-24
Identities = 111/138 (80%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || || || || |||||||||||||| ||||| |||||
Sbjct 1877121 ACCACCACCACGGAGGCGGAGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC 1877180
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|||||||||||| | || || ||||||||||| ||||| ||||||||||| |||||||
Sbjct 1877181 GGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGG 1877240
Query 41752 GGGAACGCTCTCCTTGTC 41769
||| | | |||||||||
Sbjct 1877241 GGGGATACCCTCCTTGTC 1877258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303757290400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |