Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq283 129 5e-25
seq1343 107 2e-18
seq568 86.0 5e-12
>seq283
Length=1109
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| |||||||||||| | || | |||| ||| ||||||||||| || || |
Sbjct 331 TTCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAG 272
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| ||||| || | ||||| ||||| ||||| ||| |||| | |||||||||||| ||
Sbjct 271 CAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGG 212
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || | | | ||| ||| | |||
Sbjct 211 GAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGA 152
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| ||||||||||| |||| ||||| || || ||||||||
Sbjct 151 CCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || || ||||| | || | || | ||||| ||||| || ||||| |||
Sbjct 557 CCACCACGAAGTCTTAGCACTAAGTGAAGTGTTGCTTCCTTCTGAATATTGTAGTCTGCC 498
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || || | ||||| |||||||| || ||| |||| || ||||| ||||| ||
Sbjct 497 AAAGTCCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGAGGA 438
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | | | || ||| | |||
Sbjct 437 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGCTTTCCACC 378
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | |||||| ||||| || || | || || ||||| || ||||||
Sbjct 377 TCAAGGGTAATAGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATT 330
>seq1343
Length=2062
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||||| || ||||||||||| ||||| || || |
Sbjct 1704 CCTCCACGGAGGCGGAGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTC 1763
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||||| || ||||| ||| |||| || | ||||||||| ||
Sbjct 1764 AGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGG 1823
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| ||||||| || || | | ||| || || || |||
Sbjct 1824 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCGACC 1883
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||| || |||| || ||||| || ||||||||
Sbjct 1884 TCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| || | |||||||||||||| ||||| || || |
Sbjct 792 CCACCACGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTC 851
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || |||||||||| || || || || | || || | || ||||| ||
Sbjct 852 AGGGTGCGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGA 911
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||| || | ||| || || || |||
Sbjct 912 ATTCCCTCCTTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACC 971
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || || || || || | || |||||||| ||||||||
Sbjct 972 TCTAGGGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018
>seq568
Length=22718
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | || | |||||| ||||| || ||||| ||||| |
Sbjct 8600 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 8541
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||| ||||| || | || || | ||||||||| |||
Sbjct 8540 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 8481
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | |||
Sbjct 8480 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 8421
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||||||||| | || ||||| || || |||||
Sbjct 8420 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 8374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422252242224032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |