Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1343 141 1e-28 seq568 129 6e-25 seq190 102 8e-17 seq283 95.1 1e-14 >seq1343 Length=2062 Score = 141 bits (156), Expect = 1e-28 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| ||||| || |||||||||||| | || ||||||||| | Sbjct 1475 AATGCAGATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCCTTGAGGTCGAAGCCTC 1416 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| ||||| ||| |||| ||||| ||||| ||||| | |||| Sbjct 1415 GGACACCATCGAGAACG-TCAAGTCAAAGATTCAGGACAAGGAGGGTATCCCGCCAGACC 1357 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || || | ||| || || || |||| || | ||||| || | |||||||| Sbjct 1356 AACAGCGTCTTATTTTCGCTGGTAAGCAATTGGAGGATGGTCGCACTCTGAGCGACTACA 1297 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 | |||||||||||| |||| || || Sbjct 1296 ATATCCAGAAGGAGTCCACTCTCCA 1272 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || ||||||||| |||| || || ||| | Sbjct 1702 ATGCAGATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGGCCTCA 1643 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||| ||||| | ||||| Sbjct 1642 GACACCATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCA 1584 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||| | ||| || || || || || ||| | ||||| || | |||||||| Sbjct 1583 ACAGCGTCTCATTTTCGCTGGTAAGCAACTCGAGGACAACCGCACTCTGAGTGACTACAA 1524 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| |||||||| | || || ||||| |||||||| Sbjct 1523 CATTCAGAAGGAATCAACTCTCCATCTGGTGTTGCG 1488 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || |||||||| | || ||||| ||| | Sbjct 1930 ATGCAAATCTTCGTCAAGACCCTAACTGGTAAGACCATCACTCTTGAGGTCGAGGCCTCG 1871 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| ||| || | ||||| ||||||||||| | |||||| Sbjct 1870 GACACCATCGACAATGTCAAGTCAAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 1811 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | || ||||| || |||| |||| |||||||| | ||| |||||| Sbjct 1810 CAGCGTCTCATTTTTGCTGGCAAGCAATTGGAGGACGGCCGCACCCTGAGCGATTACAAC 1751 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| |||||| | || |||||||| || Sbjct 1750 ATCCAAAAGGAGTCTACCCTGCATCTTGT 1722 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || |||||||| || || ||||| | || ||||| || || Sbjct 334 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAGACTATCACTCTTGAGGTCGAGGCTTCC 275 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| || || || || | ||||| Sbjct 274 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGACCA 216 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| ||| ||||| ||||| || |||| || ||| | | ||||||||| Sbjct 215 ACAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCTTGAGCGACTACAA 156 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || ||| | |||||||| Sbjct 155 CATCCAGAAGGAGTCAACCCTCCATTTGGTGTTGCG 120 Score = 122 bits (134), Expect = 9e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| | || || || ||||||||| |||| || || ||| | Sbjct 562 ATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTCG 503 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| ||| |||| ||||| ||||| ||||| | ||||| Sbjct 502 GACACCATTGACAACG-TCAAGTCAAAGATTCAAGACAAGGAGGGTATCCCACCCGACCA 444 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| ||| || || || || || || | |||||| | | ||||||||| Sbjct 443 ACAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACAA 384 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||| || || | || || ||||| ||| Sbjct 383 CATCCAAAAAGAATCAACCCTTCATCTCGTG 353 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || ||||| |||||| | || ||||| ||| | Sbjct 1018 ATGCAAATCTTTGTCAAGACACTCACTGGTAAAACTATCACCCTAGAGGTCGAGGCCTCA 959 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | || || || | ||||| ||||| || || | ||||| Sbjct 958 GACACCATCGATAATGTAAAATCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAA 899 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| ||| || || || ||||| |||| |||||||| | ||| |||||| Sbjct 898 CAACGTCTGATCTTCGCCGGTAAGCAACTGGAGGACGGCCGCACCCTGAGCGATTACAAC 839 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| |||||| |||| || || || ||| Sbjct 838 ATCCAAAAGGAGTCCACCCTTCACCTGGTG 809 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || || || || |||| || || || | Sbjct 790 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACTCTCGAAGTGGAGGCTTCG 731 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| ||||| | ||||| |||||||||||| | ||||| Sbjct 730 GACACGATCGACAATGTCAAGTCGAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCAA 671 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || || || ||||| || || | ||||| |||| ||||||||| Sbjct 670 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAAGATGGTCGCACTCTCAGTGACTACAAC 611 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 610 ATCCAGAAGGAGTCAACCCTTCA 588 >seq568 Length=22718 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| | || Sbjct 8374 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 8433 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||| ||| | |||||| Sbjct 8434 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 8493 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 8494 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 8553 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 8554 ATCCAGAAGGAATCCACTCTCCACCTCGT 8582 Score = 125 bits (138), Expect = 7e-24 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || ||||| | |||||| | | | |||| ||||| Sbjct 8168 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACCATTGACAACG-TCAAG 8226 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| || ||||| || |||| ||||| || ||||||| || ||| Sbjct 8227 AGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCTGGC 8286 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || |||| |||||||| | ||||||||||||||||||||| |||| || Sbjct 8287 AAGCAGCTCGAGGACGGTCGCACCCTTAGCGACTACAACATCCAGAAGGAATCCACTCTC 8346 Query 40891 CATCTAGT 40898 || || || Sbjct 8347 CACCTCGT 8354 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || |||||||| | || || ||| | | Sbjct 8602 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 8661 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| ||||| |||||| ||||||| Sbjct 8662 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 8720 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||| |||| |||| || || ||| |||||||| Sbjct 8721 GCAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAA 8780 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 8781 CATCCAGAAGGAGTCAACCCTCCA 8804 >seq190 Length=38570 Score = 102 bits (112), Expect = 8e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| ||||||| || || || |||| ||| ||||| ||||| || Sbjct 36187 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 36128 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | || |||||| |||||||||||||||||||||| ||| || || || || Sbjct 36127 GATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTTCACCTCGT 36072 >seq283 Length=1109 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || || || ||| | || || || | | Sbjct 559 ATGCAGATTTTTGTCAAGACTCTCACAGGGAAGACAATTACCCTTGAAGTTGAGAGCTCA 618 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| |||||||| || || ||||||||||| |||| ||| Sbjct 619 GATACCATTGACAATGTCAAGGCAAAAATTCAGGATAAGGAGGGCATCCCACCGGATCAG 678 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || || ||||| || || | || ||| | || |||||| Sbjct 679 CAGAGGCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACCTTGGCAGATTACAAC 738 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || ||||||||| | || ||||| | || || | |||||||| || Sbjct 739 ATTCAGAAGGAGTCGACTCTGCACTTGGTACTGAGGTTGAGGGGAGG 785 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || | || || || |||||||| | || || || | || Sbjct 787 ATGCAGATATTTGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTGGAGAGCTCC 846 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | |||| ||||| | ||||||||||| |||||| | ||||| Sbjct 847 GATACCATTGACAATGTGAAGGCTAAAATCCAGGACAAAGAGGGAATCCCCCCAGACCAA 906 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || ||| |||| || | | || ||| ||||||||| Sbjct 907 CAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGAAGGACACTCGCTGACTACAAC 966 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || || || || Sbjct 967 ATCCAGAAGGAGTCCACCCTTCACCTTGT 995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515210492795520