Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1343 123 3e-23 seq283 111 2e-19 seq568 105 8e-18 >seq1343 Length=2062 Score = 123 bits (136), Expect = 3e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||| ||| | || ||||| ||||| ||||| ||| |||||| || | Sbjct 1487 ACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTCAGAGTGCGGTT 1546 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || |||||||||||||| ||||| ||||| ||||||| || | | |||||| Sbjct 1547 GTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTT 1606 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || |||| ||| | | | ||||| | ||||| |||| |||| Sbjct 1607 GTCTTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGGCCTCCACCTCGAGGGTGA 1665 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || ||||| || ||||| || ||||| ||||| Sbjct 1666 TGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || |||||||| ||| || || |||| || | ||||| ||||| || Sbjct 1739 CTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAA 1798 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||||| ||| ||| |||| | Sbjct 1799 AATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTTGACTTGACATT 1858 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| | || || || | |||||||| || || ||||| ||||| || Sbjct 1859 GTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGAC 1918 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 1919 GAAGATTTGCAT 1930 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | ||||| || | ||| |||||| || |||||||| || | Sbjct 1248 CCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTC 1307 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | |||||||||||||| || || ||||| ||||| | ||| Sbjct 1308 AGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGG 1367 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||||| ||| | |||| |||| || | | ||||| | ||| || Sbjct 1368 ATACCCTCCTTGTCC-TGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGAC 1426 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||||||||| || || || || || || ||||| |||||| Sbjct 1427 CTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCATT 1475 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||||||||||||||| | || |||||| || || ||||| || | Sbjct 108 CCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 167 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || |||| || |||||||| || ||||| || || ||||| ||||| | || Sbjct 168 AAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGA 227 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | ||||||||| ||| || |||| ||| | | | |||||| | || || Sbjct 228 ATTCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGCCTCGAC 286 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || ||||| || ||||| ||||| |||||||| Sbjct 287 CTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| || | ||| ||||||||| || |||||||| ||| || || | Sbjct 803 ACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCC 862 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || |||||||| ||||| || || || || ||||| | || | | |||||| Sbjct 863 GTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTT 922 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || ||| | | | | ||||| | || || || | ||||| Sbjct 923 GTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGAT 982 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || || ||||| |||||||||||||| Sbjct 983 AGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | || ||| | ||||| || | || ||||||||||||||||| ||| Sbjct 1020 CCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTG 1079 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || | ||||||||||| || || || || || ||||| | || Sbjct 1080 AGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGA 1139 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||||| ||| | || | || | | | | ||||| | || || Sbjct 1140 ATTCCCTCCTTGTCC-TGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGAC 1198 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| |||||||| ||||| || || || || ||||| || ||||| Sbjct 1199 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 >seq283 Length=1109 Score = 111 bits (122), Expect = 2e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | | | ||| || || | |||||||| |||||||| ||||||||||| Sbjct 330 TCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGC 271 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || |||||||| ||||| || || | | ||||||||| | || Sbjct 270 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 211 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | |||||||||| ||| || |||| | | | ||||| |||| || Sbjct 210 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTC---TC 154 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| ||||| ||||| || || || ||||||||||| Sbjct 153 GACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || | || ||||| |||| || |||||| ||||| |||||||| ||| Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || |||||||||||||| || || || | |||||| || | || Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | || |||||| ||| ||| |||||| |||| | | | || || |||| || Sbjct 665 ATGCCCTCCTTATCC-TGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTC---TC 610 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || || || || || || || ||||| ||||| || ||||| Sbjct 609 AACTTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 >seq568 Length=22718 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | ||||| || | || || |||||||| |||||||| Sbjct 8564 TCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAG 8505 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 8504 ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 8445 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| ||| || || || | |||||||| ||||| || || ||||| || Sbjct 8444 TCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACG 8385 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 8384 AAGATCTGCAT 8374 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | || |||||| || || ||||| |||| || || || |||| || Sbjct 8811 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTC 8752 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | |||||| || ||||| || || ||||||||||| | || | | |||||||||| Sbjct 8751 CAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 8692 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | ||||| |||||||| || | |||||||| | Sbjct 8691 GATCTTCGACTTGA-CGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCT 8633 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || ||||| || ||||| ||||| Sbjct 8632 TTCCAGTAAGAGTCTTGACGAAGATCTGCAT 8602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807936282560