Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq568 140 2e-28 seq283 107 1e-18 seq1343 102 5e-17 seq190 84.2 1e-11 >seq568 Length=22718 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| ||| ||||| |||||||||||||| || |||| | || Sbjct 8585 AGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCC 8526 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || ||||||||||| ||| | || ||||||||| Sbjct 8525 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 8466 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| ||| ||||| || | |||||||| Sbjct 8465 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTC 8406 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||||||||| Sbjct 8405 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 8374 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || || ||||||| ||| | || || ||||| ||||||||||| || Sbjct 8828 CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 8769 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| ||||||||||| || ||||| || || ||||||||||| ||| Sbjct 8768 AGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 8709 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | ||||| || Sbjct 8708 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACT 8649 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || || || ||||| || || ||||||||||| Sbjct 8648 TCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 8602 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| ||| ||||| |||||||||||| Sbjct 8372 CCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTA 8313 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| || || ||||| |||||||| || || Sbjct 8312 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGA 8253 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 8252 ATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACC 8193 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 8192 TCAAGGGTGATGGTCTTGCCGGTGA 8168 >seq283 Length=1109 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | |||||| ||||| | ||| | ||| || ||||| || |||||||| || | Sbjct 330 TCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGC 271 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || || | ||||||||| || ||||| | || ||||||||| ||| Sbjct 270 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 211 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | || | || | || | ||||| Sbjct 210 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGAC 151 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||| || ||||||||||| ||||| |||||| Sbjct 150 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCATC 102 >seq1343 Length=2062 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| || ||||| || ||||||||| ||| || | || Sbjct 1263 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCC 1322 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 ||||| ||||| || |||||||| || ||||| ||||| | |||| | | ||||||||| Sbjct 1323 TCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGG-ATACCCTCCTTGTC 1381 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||| | | | || | || | | |||||| || | |||||||| Sbjct 1382 CTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGT 1441 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| || ||||| |||||||| ||||||||||| Sbjct 1442 TTTACCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || |||||||| ||| ||| ||| |||| ||||| |||||||| || ||| Sbjct 1740 TCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAA 1799 Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| ||||||||||| | |||| | || ||||||||| |||||| ||| | || Sbjct 1800 ATGAGACGCTGCTGGTCTGGCGGG-ATGCCCTCCTTGTCCTGGATCTTTGACTTGACATT 1858 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | | ||||| || | |||||||| || || || || || || || Sbjct 1859 GTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGAC 1918 Query 34378 AAAGATCTGCAT 34389 ||||| ||||| Sbjct 1919 GAAGATTTGCAT 1930 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||||| || | ||| ||| ||||| ||||||||||| Sbjct 1475 TCCACCACGAAGACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACT 1534 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| |||| ||| || | ||||| || ||||||||||| ||||| |||||| || Sbjct 1535 CAGAGTGCGGTTGTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGG 1594 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | | | | || | || | | || || Sbjct 1595 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGCCTCCAC 1654 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || ||||| || || || ||||||||||| Sbjct 1655 CTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||| || |||| |||| || | ||||||||| ||||| Sbjct 144 TCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 203 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| ||||| || | | |||||||| ||||| ||| | | | Sbjct 204 ATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTG 263 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| | ||||| || | ||||| || || || |||||||| || ||| Sbjct 264 TCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACA 323 Query 34379 AAGATCTGCAT 34389 || || ||||| Sbjct 324 AAAATTTGCAT 334 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || || ||||| || || | || |||||| || |||||||||||| | Sbjct 336 CCACCACGAAGTCTAAGCACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTC 395 Query 34223 -AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || || | || || | ||||| || ||||| ||||| ||||| |||||| || Sbjct 396 AAGGTG-CGACCCTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGG 454 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| |||||| ||| | | | | || | || | | || || Sbjct 455 GATACCCTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCAC 514 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || || | |||||| ||||| |||||||| Sbjct 515 TTCGAGGGTGATGGTCTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 562 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG--GACAGCTGACGGTCGT 34235 || |||| ||||| || ||| || || || |||||||| || || || || ||| Sbjct 1035 AGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAG-TG-CGACCGT 1092 Query 34236 CGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGT 34295 | ||||| ||||| || || || || || || || ||||| || | | |||||||| Sbjct 1093 CCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGT 1152 Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 | ||||| ||| | || | | || | || | | ||||| || | ||||||| Sbjct 1153 CCTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGG 1212 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | ||||| ||||| ||||||||||| |||||||| Sbjct 1213 TCTTGCCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 >seq190 Length=38570 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || || ||||| |||||||||||||| || |||| | || Sbjct 36069 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCC 36128 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 || | ||||||||| ||||| || || ||||| ||||| ||| | | ||||||||| Sbjct 36129 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 36187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323066676581120