Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 98.7 8e-16
seq283 86.0 5e-12
>seq1343
Length=2062
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || |||||||| || | ||||| |||||||||||||| |||||||||||| |
Sbjct 336 CCACCACGAAGTCTAAGCACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTC 395
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || || || || | ||| || || || |||| || | ||||| || ||
Sbjct 396 AAGGTGCGACCCTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGG 455
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || ||||| || ||| | | |||||| | ||| ||||| || ||| |
Sbjct 456 ATACCCTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACT 515
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||||||| | || || ||||| ||||| |||||||| |||||
Sbjct 516 TCGAGGGTGATGGTCTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 562
>seq283
Length=1109
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||||| | || ||||||| ||| || || || || || ||||||||||| || |||
Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || || ||| || | || || || ||| |||| || || || |||||| ||
Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||| |||||||| ||||| | |||||| | ||| || || | ||| |
Sbjct 665 ATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACT 606
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| ||| || | || || || | || || |||||||| |||||
Sbjct 605 TCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379337749359240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |