Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1343 98.7 8e-16 seq283 86.0 5e-12 >seq1343 Length=2062 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||||||| || | ||||| |||||||||||||| |||||||||||| | Sbjct 336 CCACCACGAAGTCTAAGCACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTC 395 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || || || | ||| || || || |||| || | ||||| || || Sbjct 396 AAGGTGCGACCCTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGG 455 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || ||||| || ||| | | |||||| | ||| ||||| || ||| | Sbjct 456 ATACCCTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACT 515 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | || || ||||| ||||| |||||||| ||||| Sbjct 516 TCGAGGGTGATGGTCTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 562 >seq283 Length=1109 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| | || ||||||| ||| || || || || || ||||||||||| || ||| Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||| || | || || || ||| |||| || || || |||||| || Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| |||||||| ||||| | |||||| | ||| || || | ||| | Sbjct 665 ATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACT 606 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||| || | || || || | || || |||||||| ||||| Sbjct 605 TCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379337749359240