Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1343 122 8e-23 seq568 104 2e-17 >seq1343 Length=2062 Score = 122 bits (134), Expect = 8e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| || || || || || ||||| | || || || | || Sbjct 1931 CATGCAAATCTTCGTCAAGACCCTAACTGGTAAGACCATCACTCTTGAGGTCGAGGCCTC 1872 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | ||||| || ||| | ||||||||| ||| | ||||| |||| Sbjct 1871 GGACACCATCGACAATGTCAAGTCAAAGA-TCCAGGACAAGGAGGGCATCCCGCCAGACC 1813 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||||| || || |||||||| || ||||| ||| || |||||||||| | Sbjct 1812 AGCAGCGTCTCATTTTTGCTGGCAAGCAATTGGAGGACGGCCGCACCCTGAGCGATTACA 1753 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| ||||| || || || || ||||| || || Sbjct 1752 ACATCCAAAAGGAGTCTACCCTGCATCTTGTTCT 1719 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || || ||| |||| || || || |||||| |||| || || | || Sbjct 563 CATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTC 504 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| | || | ||||| || ||| | | ||||||| || | || ||||||| Sbjct 503 GGACACCATTGACAACGTCAAGTCAAAGATTCAAG-ACAAGGAGGGTATCCCACCCGACC 445 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | |||||||| || ||||| || || || | || || | || ||||||| || | Sbjct 444 AACAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACA 385 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| ||||||||||| || |||||||| || |||||||| | || |||| Sbjct 384 ACATCCAAAAAGAATCAACCCTTCATCTCGTGCTTAGACTTCGTGGTGGTA 334 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||||| || || || || ||||| | || || || | ||| Sbjct 334 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAGACTATCACTCTTGAGGTCGAGGCTTCC 275 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||||||| | || || ||||| Sbjct 274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGACCAA 215 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| | || ||| || ||||||| || ||| Sbjct 214 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCTTGAGCGACTACAAC 155 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || || || ||| |||| Sbjct 154 ATCCAGAAGGAGTCAACCCTCCATTTGGT 126 >seq568 Length=22718 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || ||||| | || || || ||||| Sbjct 8374 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 8433 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| ||| | || || |||||| Sbjct 8434 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 8493 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| ||| | || || ||| | ||| || ||| Sbjct 8494 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 8553 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| ||||| || || || || Sbjct 8554 ATCCAGAAGGAATCCACTCTCCACCTCGTCCT 8585 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || ||||| | || || ||| | || Sbjct 8602 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 8661 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| || | || || |||||| Sbjct 8662 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 8721 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || |||||||| ||| | || | || || ||| Sbjct 8722 CAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAAC 8781 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || || || || || || |||| || ||||| | |||||| Sbjct 8782 ATCCAGAAGGAGTCAACCCTCCACTTGGTGCTCAGACTTCGTGGCGGT 8829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445758866547840