Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 122 8e-23
seq568 104 2e-17
>seq1343
Length=2062
Score = 122 bits (134), Expect = 8e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| || || || || || ||||| | || || || | ||
Sbjct 1931 CATGCAAATCTTCGTCAAGACCCTAACTGGTAAGACCATCACTCTTGAGGTCGAGGCCTC 1872
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| |||| | ||||| || ||| | ||||||||| ||| | ||||| ||||
Sbjct 1871 GGACACCATCGACAATGTCAAGTCAAAGA-TCCAGGACAAGGAGGGCATCCCGCCAGACC 1813
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||||||||| || || |||||||| || ||||| ||| || |||||||||| |
Sbjct 1812 AGCAGCGTCTCATTTTTGCTGGCAAGCAATTGGAGGACGGCCGCACCCTGAGCGATTACA 1753
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||| ||||| || || || || ||||| || ||
Sbjct 1752 ACATCCAAAAGGAGTCTACCCTGCATCTTGTTCT 1719
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| ||||| || || ||| |||| || || || |||||| |||| || || | ||
Sbjct 563 CATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTC 504
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| | || | ||||| || ||| | | ||||||| || | || |||||||
Sbjct 503 GGACACCATTGACAACGTCAAGTCAAAGATTCAAG-ACAAGGAGGGTATCCCACCCGACC 445
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
| |||||||| || ||||| || || || | || || | || ||||||| || |
Sbjct 444 AACAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACA 385
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||| ||||||||||| || |||||||| || |||||||| | || ||||
Sbjct 384 ACATCCAAAAAGAATCAACCCTTCATCTCGTGCTTAGACTTCGTGGTGGTA 334
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||||| || || || || ||||| | || || || | |||
Sbjct 334 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAGACTATCACTCTTGAGGTCGAGGCTTCC 275
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||||||||| | || || |||||
Sbjct 274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGACCAA 215
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| ||| | || ||| || ||||||| || |||
Sbjct 214 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCTTGAGCGACTACAAC 155
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|| || || || || || || ||| ||||
Sbjct 154 ATCCAGAAGGAGTCAACCCTCCATTTGGT 126
>seq568
Length=22718
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || || || |||||
Sbjct 8374 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 8433
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| ||| | || || ||||||
Sbjct 8434 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 8493
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||||||||| ||| | || || ||| | ||| || |||
Sbjct 8494 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 8553
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || ||||| ||||| || || || ||
Sbjct 8554 ATCCAGAAGGAATCCACTCTCCACCTCGTCCT 8585
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || || || || ||||| | || || ||| | ||
Sbjct 8602 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 8661
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| || | || || ||||||
Sbjct 8662 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 8721
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| || || |||||||| ||| | || | || || |||
Sbjct 8722 CAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAAC 8781
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || || || || || || || |||| || ||||| | ||||||
Sbjct 8782 ATCCAGAAGGAGTCAACCCTCCACTTGGTGCTCAGACTTCGTGGCGGT 8829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445758866547840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |