Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1343 105 7e-18 seq568 96.9 3e-15 seq283 84.2 2e-11 >seq1343 Length=2062 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 792 CCACCACGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTC 851 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || || || ||||| || ||||||||||||| || || ||||| Sbjct 852 AGGGTGCGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGA 911 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || ||||| | || | ||||| | || ||| ||| Sbjct 912 ATTCCCTCCTTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACC 971 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | || || || || | || || || || ||||||||| || Sbjct 972 TCTAGGGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCATACCT 1022 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| ||| | || ||||||| || ||||| || || ||||| || || || Sbjct 563 GCCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACT 622 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||||||||||| || || ||| |||||| ||| || || || || || Sbjct 623 GAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGG 682 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| |||||| || | | || | ||||| | | |||||| Sbjct 683 GATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCAC 742 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| |||||||| || || ||||| || |||||| Sbjct 743 TTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCATA 791 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| ||| | || ||||| | || || || |||||||| || || || || Sbjct 1020 CCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTG 1079 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || | || ||||||||| ||||||||||||| || || ||||| Sbjct 1080 AGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGA 1139 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | || | | || | ||||| | || ||| || Sbjct 1140 ATTCCCTCCTTGTC-CTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGAC 1198 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||| | ||| | |||||||| || | ||||| || || || |||||| || Sbjct 1199 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCATACCT 1250 >seq568 Length=22718 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || || || || ||||| || ||||| | |||| ||| |||||||| || ||| Sbjct 8342 GTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCA 8283 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || || |||||||| ||||| |||||||| ||||| ||| || || Sbjct 8282 GCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTG 8223 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | | || | ||||||| | ||| ||||||| ||| | ||||||||||| Sbjct 8222 ACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 8170 >seq283 Length=1109 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 |||||||||| || ||||||||||||||| ||||| | |||| || || Sbjct 311 ACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCAAGGGTGCGGCCATCCTCA 252 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || |||||| | |||| | ||||| || || || || || || ||||| | Sbjct 251 AGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 192 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||| | | ||| ||||||| ||| | |||||| Sbjct 191 ATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTCTTG 132 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | ||||| ||||| |||||||| Sbjct 131 CCAGTTAGAGTTTTCACGAAGATTTGCAT 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496055616518400