Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 105 7e-18
seq568 96.9 3e-15
seq283 84.2 2e-11
>seq1343
Length=2062
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || | ||||| || ||||| ||||| ||||| |||||||||
Sbjct 792 CCACCACGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTC 851
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| || || || ||||| || ||||||||||||| || || |||||
Sbjct 852 AGGGTGCGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGA 911
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || ||||| | || | ||||| | || ||| |||
Sbjct 912 ATTCCCTCCTTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACC 971
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| | ||| | || || || || | || || || || ||||||||| ||
Sbjct 972 TCTAGGGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCATACCT 1022
Score = 102 bits (112), Expect = 8e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || |||| ||| | || ||||||| || ||||| || || ||||| || || ||
Sbjct 563 GCCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACT 622
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| |||| ||||||||||| || || ||| |||||| ||| || || || || ||
Sbjct 623 GAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGG 682
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| |||||| || | | || | ||||| | | ||||||
Sbjct 683 GATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCAC 742
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| |||||||| || || ||||| || ||||||
Sbjct 743 TTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCATA 791
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| ||| | || ||||| | || || || |||||||| || || || ||
Sbjct 1020 CCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTG 1079
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| || | || ||||||||| ||||||||||||| || || |||||
Sbjct 1080 AGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGA 1139
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || ||||| ||| | || | || | | || | ||||| | || ||| ||
Sbjct 1140 ATTCCCTCCTTGTC-CTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGAC 1198
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
||| | ||| | |||||||| || | ||||| || || || |||||| ||
Sbjct 1199 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCATACCT 1250
>seq568
Length=22718
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || || ||||| || ||||| | |||| ||| |||||||| || |||
Sbjct 8342 GTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCA 8283
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || || |||||||| ||||| |||||||| ||||| ||| || ||
Sbjct 8282 GCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTG 8223
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| | || | ||||||| | ||| ||||||| ||| | |||||||||||
Sbjct 8222 ACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 8170
>seq283
Length=1109
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|||||||||| || ||||||||||||||| ||||| | |||| || ||
Sbjct 311 ACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCAAGGGTGCGGCCATCCTCA 252
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
||||| || |||||| | |||| | ||||| || || || || || || ||||| |
Sbjct 251 AGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 192
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| || || | | || | ||||| | | ||| ||||||| ||| | ||||||
Sbjct 191 ATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTCTTG 132
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || | ||||| ||||| ||||||||
Sbjct 131 CCAGTTAGAGTTTTCACGAAGATTTGCAT 103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496055616518400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |