Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1343 116 3e-21 seq283 93.3 3e-14 >seq1343 Length=2062 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | ||||||||||||| || |||||| || | ||||| ||| | Sbjct 108 CCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 167 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || ||||| |||| || | || |||||||| || |||| |||||||| || | || Sbjct 168 AAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGA 227 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| ||||| || | | |||||| ||||||||| Sbjct 228 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACC 287 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| || || || ||||| || |||||||||||||| Sbjct 288 TCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 >seq283 Length=1109 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| | ||| || | ||| || || | ||||||||| ||||| | |||||||| | Sbjct 329 CCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCA 270 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || || | || ||||| ||||||||||| | ||| || || | || Sbjct 269 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGA 210 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | ||| || || || |||| | ||||| | ||| ||||| ||| |||||| Sbjct 209 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAG-AGCTCTCGAC 151 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || |||||||||||||| || |||||||| Sbjct 150 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381363315982416