Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1343 104 2e-17 >seq1343 Length=2062 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | || | ||| | ||| | ||||| || ||||| ||||||||||||||| Sbjct 1704 CCTCCACGGAGGCGGAGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTC 1763 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| || | ||| || |||||| | || ||||| ||||| || || || Sbjct 1764 AGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGG 1823 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || ||||| || ||| || | | || | ||||||| || || || Sbjct 1824 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCGACC 1883 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | ||||| || || | || || ||||| |||||||| Sbjct 1884 TCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||||| || ||||||||||| |||||||| ||||||| |||| || |||||||| Sbjct 359 ATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCCTCCTCGAGTTG 418 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 || || || |||| ||||| || || ||||| || || || || ||||| ||| || Sbjct 419 CTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCTT 478 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 | || | | || | ||||||| || || ||||| | || | ||||| || || Sbjct 479 TGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGT 538 Query 143161 CAATGTTTTTACGAATATTTGCAT 143184 ||| ||||| || || || ||||| Sbjct 539 CAAAGTTTTGACAAAAATCTGCAT 562 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || || ||||| |||||||||||||||| |||| ||| || ||||| Sbjct 816 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCCAGTTGC 875 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 ||||| || ||||||||||||| || || ||||| || || || ||||| || || Sbjct 876 TTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATCTTC 935 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 ||||| | || | ||||| | || || || || | || | || || || || Sbjct 936 GATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATAGTTTTACCAGTG 995 Query 143162 AATGTTTTTACGAATATTTGCATAGCT 143188 | ||| || || || ||||||||| || Sbjct 996 AGTGTCTTGACAAAGATTTGCATACCT 1022 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| |||| ||| | || || || | || ||||| ||||| || ||||| || || Sbjct 1020 CCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTG 1079 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| || | ||| ||||||||| ||||||||||||| || || ||||| Sbjct 1080 AGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGA 1139 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || ||||| ||| || || | | || | ||||| | || || || Sbjct 1140 ATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACC 1199 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | || | |||||||| || | ||||| || || || |||||| || Sbjct 1200 TCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCATACCT 1250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507005831456640