Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1343 116 3e-21 seq283 87.8 1e-12 >seq1343 Length=2062 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || ||||| |||||||||||||| || | | |||| || | ||| Sbjct 816 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCCAGTTGC 875 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || ||| | |||| |||||||||||| |||||||| || ||||| || || Sbjct 876 TTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATCTTC 935 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 |||||| | || ||||| || || || |||| ||| || |||||||| || Sbjct 936 GATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATAGTTTTACCAGTG 995 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||||||| Sbjct 996 AGTGTCTTGACAAAGATTTGCATA 1019 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || ||||| || || ||||| || ||||| || || ||| | | |||| || Sbjct 1038 ACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCC 1097 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 ||||| || ||||| | |||| |||||||||||| |||||||| || ||||| | Sbjct 1098 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGA 1157 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || || || || || || || | ||| ||||| || Sbjct 1158 ATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTG 1217 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || ||||| |||||||| |||||| Sbjct 1218 CCTGTGAGGGTTTTCACAAAAATCTGCATA 1247 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || ||||| ||||| || || || || |||||||| ||||| | | | |||| Sbjct 123 AACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCC 182 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | || ||||| ||| | |||| ||| |||||||| ||||||||||| ||||| Sbjct 183 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCC 242 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| || | || ||||| ||| | || || || | || || || Sbjct 243 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATAGTC 302 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || ||||| || ||||||||||||||| Sbjct 303 TTACCCGTGAGAGTCTTGACAAAAATTTGCATA 335 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || || ||||| || || || || ||||| ||||| ||| | | | || || Sbjct 1266 ACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCC 1325 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 ||||| || |||||| | || | ||| |||||||| || || || || ||||| | Sbjct 1326 AATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGA 1385 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || ||||| || ||| || || | ||| ||||||||| Sbjct 1386 ATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGTTTTA 1445 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || || ||||| Sbjct 1446 CCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | ||| ||||| || || ||||| |||||||||||||| || | | |||| || Sbjct 1721 AACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTC 1780 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 ||||| |||||||| | || | ||| || ||||| || || || || ||||| Sbjct 1781 CAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 1840 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| ||| | || ||||| || || || || | || ||||| || Sbjct 1841 GATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTT 1900 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || || || || || |||||||| Sbjct 1901 ACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930 >seq283 Length=1109 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || |||||||| || || | || | || || || || Sbjct 989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGC 930 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | |||||||| || ||||| |||||||| ||||| Sbjct 929 TTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTA 870 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||||||| | || || || || || ||||| || || ||| Sbjct 869 GCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTC 810 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | || || ||||| || ||||| Sbjct 809 AAGGTCTTAACAAATATCTGCAT 787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362173232192232