Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 116 3e-21
seq283 87.8 1e-12
>seq1343
Length=2062
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || ||||| |||||||||||||| || | | |||| || | |||
Sbjct 816 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCCAGTTGC 875
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | |||| |||||||||||| |||||||| || ||||| || ||
Sbjct 876 TTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATCTTC 935
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
|||||| | || ||||| || || || |||| ||| || |||||||| ||
Sbjct 936 GATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATAGTTTTACCAGTG 995
Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364
|| || || ||||| |||||||||
Sbjct 996 AGTGTCTTGACAAAGATTTGCATA 1019
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || || ||||| || || ||||| || ||||| || || ||| | | |||| ||
Sbjct 1038 ACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCC 1097
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
||||| || ||||| | |||| |||||||||||| |||||||| || ||||| |
Sbjct 1098 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGA 1157
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| ||| ||| ||| | || || || || || || || | ||| ||||| ||
Sbjct 1158 ATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTG 1217
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| || ||||| |||||||| ||||||
Sbjct 1218 CCTGTGAGGGTTTTCACAAAAATCTGCATA 1247
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || ||||| ||||| || || || || |||||||| ||||| | | | ||||
Sbjct 123 AACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCC 182
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | || ||||| ||| | |||| ||| |||||||| ||||||||||| |||||
Sbjct 183 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCC 242
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
|| ||| ||| || | || ||||| ||| | || || || | || || ||
Sbjct 243 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATAGTC 302
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| || ||||| || |||||||||||||||
Sbjct 303 TTACCCGTGAGAGTCTTGACAAAAATTTGCATA 335
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || || || ||||| || || || || ||||| ||||| ||| | | | || ||
Sbjct 1266 ACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCC 1325
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
||||| || |||||| | || | ||| |||||||| || || || || ||||| |
Sbjct 1326 AATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGA 1385
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| || ||| || | || ||||| || ||| || || | ||| |||||||||
Sbjct 1386 ATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGTTTTA 1445
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| || || || |||||
Sbjct 1446 CCAGTGAGGGTTTTCACGAAGATCTGCAT 1474
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| | ||| ||||| || || ||||| |||||||||||||| || | | |||| ||
Sbjct 1721 AACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTC 1780
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
||||| |||||||| | || | ||| || ||||| || || || || |||||
Sbjct 1781 CAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 1840
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
|| || ||| ||| | || ||||| || || || || | || ||||| ||
Sbjct 1841 GATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTT 1900
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||| || || || || || || ||||||||
Sbjct 1901 ACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930
>seq283
Length=1109
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || || || |||||||| || || | || | || || || ||
Sbjct 989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGC 930
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| ||||| | ||||| | |||||||| || ||||| |||||||| |||||
Sbjct 929 TTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTA 870
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||||||| | || || || || || ||||| || || |||
Sbjct 869 GCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTC 810
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
| || || ||||| || |||||
Sbjct 809 AAGGTCTTAACAAATATCTGCAT 787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362173232192232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |