Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq283 154 3e-32 seq1343 127 5e-24 >seq283 Length=1109 Score = 154 bits (170), Expect = 3e-32 Identities = 168/222 (76%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || |||| || | ||| | ||| ||||||||||| ||||| | | ||| | Sbjct 548 AGTCTTAGCACTAAGTGAAGTGTTGCTTCCTTCTGAATATTGTAGTCTGCCAAAGTCCGG 489 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || ||||| ||||||||||||||||||||||| || ||||| || ||||| Sbjct 488 CCATCCTCAAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGAGGAATACCTTCC 429 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || || || ||||| | || ||||| || | ||| || ||| ||| ||||| || Sbjct 428 TTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGCT---TTCCACCTCAAGG 372 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||||||||| ||||| || || || ||||| ||||||||| Sbjct 371 GTAATAGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATT 330 Score = 125 bits (138), Expect = 2e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || | ||| ||||| | || | || || || |||||||| || || || Sbjct 788 ATCCCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCT 729 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | ||| || || || || || |||||||| || |||||||| ||||| || Sbjct 728 GCCAAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGT 669 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || ||||||||||| ||||| || ||||| || | |||||| || | || Sbjct 668 GGGATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATC-TGAGCTCTC 610 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| ||||| || || || || || ||||| |||||||| Sbjct 609 AACTTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||| || || || || || || | || || ||| Sbjct 983 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGCTTCCCA 924 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | ||||||||| || || || ||||| ||||| ||||| || || || || Sbjct 923 GCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTC 864 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||||| || | || ||||| | || || ||||| ||||| | || Sbjct 863 ACATTGTCAATGGTATCGG-AGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGT 805 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 804 CTTAACAAATATCTGCAT 787 Score = 113 bits (124), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| ||||| || |||| || | || ||||| ||||| || || ||| Sbjct 332 ATTCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCA 273 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || || || || ||||||||||| | |||||| || || || Sbjct 272 GCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGG 213 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || ||||| ||||| || || ||||| || | || || || | || Sbjct 212 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTC-AGAGCTCTC 154 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| || ||||| || || || ||||| Sbjct 153 GACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103 >seq1343 Length=2062 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||| || ||||| || |||||||| |||||| ||||| | |||||| || | ||| Sbjct 1044 TGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCCAATTGC 1103 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || || | ||||| || ||||| ||||| || || ||||||||||| Sbjct 1104 TTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGAATCTTG 1163 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | || || | || ||||| || || || ||||| || || Sbjct 1164 GACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCTGTG 1223 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| |||||||| Sbjct 1224 AGGGTTTTCACAAAAATCTGCAT 1246 Score = 122 bits (134), Expect = 2e-22 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| ||||| ||||| | ||| || || | ||| || ||| Sbjct 1278 GTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCCAATTGCTTACCA 1337 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | |||||| || || || || || || || ||||||||||||| || Sbjct 1338 GCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGAATCTTTGACTTG 1397 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || | ||| ||| ||||| || || || || |||||||| || || Sbjct 1398 ACGTTCTCGATGGTGTC-CGAGGCTTCGACCTCAAGGGTGATGGTTTTACCAGTGAGGGT 1456 Query 104542 TTTTACAAATATCTGCATT 104560 ||| || || ||||||||| Sbjct 1457 TTTCACGAAGATCTGCATT 1475 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || | ||||| || || || || || Sbjct 138 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCAAGCTGCTTGCCG 197 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | |||||| || ||||| |||||||| || ||||| ||||| | || Sbjct 198 GCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTG 257 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| || || ||||| || || ||||||||||| || || || Sbjct 258 ACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATAGTCTTACCCGTGAGAGTC 317 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 318 TTGACAAAAATTTGCAT 334 Score = 102 bits (112), Expect = 2e-16 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || || || || || || || || || | ||||| Sbjct 1719 AGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCC 1778 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | ||| || ||||||||||| || | ||| || || || || || || || || ||| Sbjct 1779 TCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 1838 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGT 104526 || ||||||| || ||||| || | ||| || | ||| || ||||| || || || || Sbjct 1839 TGGATCTTTGACTTGACATTGTCGATGGTGTC-CGAGGCCTCGACCTCAAGAGTGATGGT 1897 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||||||| || || || || || || ||||| Sbjct 1898 CTTACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || |||||| ||||| | ||| ||||| || || ||||| Sbjct 594 GTTGACTCCTTCTGGATGTTGTAGTCACTGAGAGTGCGACCATCTTCGAGCTGCTTTCCG 653 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | |||||| || || || || || || || ||||| || || | || Sbjct 654 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTTTCGACTTG 713 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || || || || || || || |||||||||||||| || | || Sbjct 714 ACATTGTCGATCGTGTCCGAAGCCTCCACTTCGAGAGTAATAGTCTTACCGGTCAAGGTC 773 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 774 TTGACGAAAATCTGCAT 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151378454901216