Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq283 154 3e-32
seq1343 127 5e-24
>seq283
Length=1109
Score = 154 bits (170), Expect = 3e-32
Identities = 168/222 (76%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || |||| || | ||| | ||| ||||||||||| ||||| | | ||| |
Sbjct 548 AGTCTTAGCACTAAGTGAAGTGTTGCTTCCTTCTGAATATTGTAGTCTGCCAAAGTCCGG 489
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || ||||| ||||||||||||||||||||||| || ||||| || |||||
Sbjct 488 CCATCCTCAAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGAGGAATACCTTCC 429
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518
|| || || ||||| | || ||||| || | ||| || ||| ||| ||||| ||
Sbjct 428 TTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGCT---TTCCACCTCAAGG 372
Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||||||||| ||||| || || || ||||| |||||||||
Sbjct 371 GTAATAGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATT 330
Score = 125 bits (138), Expect = 2e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || | ||| ||||| | || | || || || |||||||| || || ||
Sbjct 788 ATCCCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCT 729
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || | ||| || || || || || |||||||| || |||||||| ||||| ||
Sbjct 728 GCCAAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGT 669
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || ||||||||||| ||||| || ||||| || | |||||| || | ||
Sbjct 668 GGGATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATC-TGAGCTCTC 610
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || ||||| ||||| || || || || || ||||| ||||||||
Sbjct 609 AACTTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559
Score = 120 bits (132), Expect = 7e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||||| || || || || || || | || || |||
Sbjct 983 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGCTTCCCA 924
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | ||||||||| || || || ||||| ||||| ||||| || || || ||
Sbjct 923 GCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTC 864
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||||||| || | || ||||| | || || ||||| ||||| | ||
Sbjct 863 ACATTGTCAATGGTATCGG-AGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGT 805
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||||||||||||
Sbjct 804 CTTAACAAATATCTGCAT 787
Score = 113 bits (124), Expect = 1e-19
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||| ||||| || |||| || | || ||||| ||||| || || |||
Sbjct 332 ATTCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCA 273
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || || || ||||||||||| | |||||| || || ||
Sbjct 272 GCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGG 213
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| ||||| || || ||||| || | || || || | ||
Sbjct 212 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTC-AGAGCTCTC 154
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| || ||||| || || || |||||
Sbjct 153 GACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103
>seq1343
Length=2062
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||| || ||||| || |||||||| |||||| ||||| | |||||| || | |||
Sbjct 1044 TGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCCAATTGC 1103
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || || | ||||| || ||||| ||||| || || |||||||||||
Sbjct 1104 TTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGAATCTTG 1163
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || | || ||||| || || || ||||| || ||
Sbjct 1164 GACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCTGTG 1223
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
|| ||||| ||||| ||||||||
Sbjct 1224 AGGGTTTTCACAAAAATCTGCAT 1246
Score = 122 bits (134), Expect = 2e-22
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| ||||| ||||| ||||| | ||| || || | ||| || |||
Sbjct 1278 GTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCCAATTGCTTACCA 1337
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || | |||||| || || || || || || || ||||||||||||| ||
Sbjct 1338 GCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGAATCTTTGACTTG 1397
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| || | ||| ||| ||||| || || || || |||||||| || ||
Sbjct 1398 ACGTTCTCGATGGTGTC-CGAGGCTTCGACCTCAAGGGTGATGGTTTTACCAGTGAGGGT 1456
Query 104542 TTTTACAAATATCTGCATT 104560
||| || || |||||||||
Sbjct 1457 TTTCACGAAGATCTGCATT 1475
Score = 104 bits (114), Expect = 5e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| | || | ||||| || || || || ||
Sbjct 138 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCAAGCTGCTTGCCG 197
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | |||||| || ||||| |||||||| || ||||| ||||| | ||
Sbjct 198 GCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTG 257
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| || || ||||| || || ||||||||||| || || ||
Sbjct 258 ACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATAGTCTTACCCGTGAGAGTC 317
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 318 TTGACAAAAATTTGCAT 334
Score = 102 bits (112), Expect = 2e-16
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||||| || || || || || || || || || | |||||
Sbjct 1719 AGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCC 1778
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| | ||| || ||||||||||| || | ||| || || || || || || || || |||
Sbjct 1779 TCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 1838
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGT 104526
|| ||||||| || ||||| || | ||| || | ||| || ||||| || || || ||
Sbjct 1839 TGGATCTTTGACTTGACATTGTCGATGGTGTC-CGAGGCCTCGACCTCAAGAGTGATGGT 1897
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||||||| || || || || || || |||||
Sbjct 1898 CTTACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || |||||| ||||| | ||| ||||| || || |||||
Sbjct 594 GTTGACTCCTTCTGGATGTTGTAGTCACTGAGAGTGCGACCATCTTCGAGCTGCTTTCCG 653
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | | |||||| || || || || || || || ||||| || || | ||
Sbjct 654 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTTTCGACTTG 713
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || || || || || || |||||||||||||| || | ||
Sbjct 714 ACATTGTCGATCGTGTCCGAAGCCTCCACTTCGAGAGTAATAGTCTTACCGGTCAAGGTC 773
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 774 TTGACGAAAATCTGCAT 790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151378454901216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |