Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq283 109 5e-19 seq1343 89.7 4e-13 >seq283 Length=1109 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | || ||| | |||||| ||||| |||||||| ||||||||||||||||||| | Sbjct 329 CCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAG-C 271 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || | ||||| |||||||| || | |||| || | |||||| ||| || Sbjct 270 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 211 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || ||||||||| || || ||||| | | || || || | ||| Sbjct 210 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGAC 151 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || ||||| || || || ||||||||||| || || |||||| Sbjct 150 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCATC 102 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | |||||| | || || || || || |||||| |||||||||||||| ||| Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || | ||||| ||||||||||| | | || | | |||||||||| || Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||| ||| |||||| ||||| | | |||||||| | ||| Sbjct 665 ATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACT 606 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || || |||||||| || |||||||||||||| Sbjct 605 TCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 >seq1343 Length=2062 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | || || || || || ||| |||||| || || ||||| || Sbjct 1247 ACCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCT 1306 Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || | || || | ||||||| |||||||| || |||| | |||||| || || || Sbjct 1307 CAGAGTG-CGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCG 1365 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || ||||||||| ||| || ||||| | | ||||| || | || || || Sbjct 1366 GGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTCCG-AGGCTTCG 1424 Query 48678 TC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || | || ||||||||||| ||||| |||||||| || |||||||| Sbjct 1425 ACCTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421244258833352