Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq283 127 2e-24 seq1343 120 3e-22 seq568 98.7 9e-16 >seq283 Length=1109 Score = 127 bits (140), Expect = 2e-24 Identities = 172/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||||||||||| | | ||| ||||| | ||| || ||||| | Sbjct 342 AAAAATCTGCATTCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAAT 283 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| | ||| | |||||| ||||| || || |||| || || || || Sbjct 282 GTTGTAATCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTG 223 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| || || |||||||| || ||||| | || || |||||||| | | |||||| Sbjct 222 CTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTC 163 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| |||| |||||||| || ||||| ||||||||||| ||||| ||||| Sbjct 162 AGAGCTCTCGACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103 Score = 114 bits (126), Expect = 1e-20 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| ||||| | || |||||||||| ||| || ||||| || | ||| ||||| | Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || || || |||||| ||||| || || ||||||| | || |||||||| || | Sbjct 725 A-AG-GTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTG 668 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || || || || || | ||||||||||||||| | | | || || | | || | Sbjct 667 GGATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAA 608 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | |||| || || || || || || ||||| || ||||| |||||||||| Sbjct 607 CTTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCATGC 557 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||| ||||| | || | |||||| || | || || || || ||| | |||||| Sbjct 540 CACTAAGTGAAGTGTTGCTTCCTTCTGAATATTGTAGTCTGCCAAAGTCCGGCCATCCTC 481 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| || |||| |||| || || || ||||||||||||||||| ||||| | Sbjct 480 AAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 421 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || | |||||| | | | ||||||| | || || |||| || || || || Sbjct 420 GATCTTGGACTTGACATTGTCAATGGTGTCAGAGCTTTCCACCTCAAGGGTAATAGTCTT 361 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| || || || ||||| |||||||| Sbjct 360 TCCAGTGAGGGTCTTAACAAAAATCTGCAT 331 >seq1343 Length=2062 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| || ||||| || | || || ||||||| |||| ||||||| Sbjct 1266 ACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCC 1325 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | || || || | || || | | || || ||||| || ||||| || ||||| | | Sbjct 1326 AATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGA 1385 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || |||| ||||||| ||| ||||| | | ||||| |||| ||||||||||| Sbjct 1386 ATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGTTTTA 1445 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || |||||||| ||||||||||| Sbjct 1446 CCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||||||||| || | || || ||||| || | ||| || ||||||| || | Sbjct 120 CGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 179 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | | || || ||||||||||| ||||| ||| Sbjct 180 TCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTG 239 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | ||||||| | ||| ||||| | ||||| |||| ||||| Sbjct 240 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATA 299 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| || ||||| || ||||| Sbjct 300 GTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || ||||||||||| | || || || || | |||| |||||| Sbjct 1038 ACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCC 1097 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | || || || ||||||| | | ||| || ||||||||||| || || ||||| | | Sbjct 1098 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGA 1157 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||| || | | | |||||| | | ||||| || | |||||||| || Sbjct 1158 ATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTG 1217 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||||||||| |||||||| Sbjct 1218 CCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || || |||||||| | ||| |||||||||| ||| | ||||| Sbjct 809 CACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTC 868 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||| || || ||| | ||||| | | ||| || ||||||||||| || || ||||| | Sbjct 869 CAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTG 928 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || | || || ||| ||||| | | ||||| || | ||||| ||||| Sbjct 929 GATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATAGTTTT 988 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || |||||||| ||||| Sbjct 989 ACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||| || | ||| |||||||| || | ||| || || |||| |||| | Sbjct 1488 CGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTCAGAGTGCGGTTG 1547 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || || || | || || | | || || || || || ||||| || ||| Sbjct 1548 TCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTG 1607 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | | | ||||| | | || || || | |||||| Sbjct 1608 TCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGCCTCCACCTCGAGGGTGATG 1667 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || || || || ||||||||||| Sbjct 1668 GTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 >seq568 Length=22718 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 ||||||||| | || || ||||| || | ||| || || | || || || ||| Sbjct 8811 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAG--AGAGCGTACGACCGTCC 8754 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||| ||| |||||| | ||||| | | ||||| || || || ||||| || ||||| Sbjct 8753 TCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 8694 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || | ||||||| | ||| ||||| | || || || | |||||||| Sbjct 8693 TGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTC 8634 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||||||||| || || ||||||||||| Sbjct 8633 TTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 8602 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| |||||||| || | ||| || ||| | ||| | |||||| ||||| Sbjct 8577 GTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTG 8518 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || | ||||| | | ||||| ||||| ||||| || || ||||| | || || Sbjct 8517 CTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 8458 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 | |||||| | ||| ||||| | ||||| |||| |||||||| || || || Sbjct 8457 CGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 8398 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||| Sbjct 8397 GAGGGTCTTGACGAAGATCTGCAT 8374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448283623878720