Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq743 98.7 3e-15 seq598 98.7 3e-15 seq503 98.7 3e-15 >seq743 Length=49346 Score = 98.7 bits (108), Expect = 3e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 65848 AACTGCACGACCATTCCTTGTGCGTTACGAATCGTTCCGTCATAATTGCACATATTATCT 65907 |||||||| || ||| | | |||||| | || ||||| || ||| ||| ||| Sbjct 19559 AACTGCACAACGTCGCCTAGGGAGTTACGGACGGTACCGTCGTACTTGGCCATGACTTCT 19500 Query 65908 TCACTTGCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTA 65967 ||| ||||||||| |||| |||||||||||||||| | | || || || || |||||| Sbjct 19499 TCAAGTGCCTTTACGAGACGACGCTGGATGTAACCAGTTTCGGCGGTCTTGACAGCGGTA 19440 Query 65968 TCAACGAGACCTTCACGCCCGGACATTGC 65996 |||| ||||||||||| || | ||| || Sbjct 19439 TCAATCAGACCTTCACGACCAGCCATGGC 19411 >seq598 Length=20695 Score = 98.7 bits (108), Expect = 3e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 65848 AACTGCACGACCATTCCTTGTGCGTTACGAATCGTTCCGTCATAATTGCACATATTATCT 65907 |||||||| || ||| | | |||||| | || ||||| || ||| ||| ||| Sbjct 11511 AACTGCACAACGTCGCCTAGGGAGTTACGGACGGTACCGTCGTACTTGGCCATGACTTCT 11452 Query 65908 TCACTTGCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTA 65967 ||| ||||||||| |||| |||||||||||||||| | | || || || || |||||| Sbjct 11451 TCAAGTGCCTTTACGAGACGACGCTGGATGTAACCAGTTTCGGCGGTCTTGACAGCGGTA 11392 Query 65968 TCAACGAGACCTTCACGCCCGGACATTGC 65996 |||| ||||||||||| || | ||| || Sbjct 11391 TCAATCAGACCTTCACGACCAGCCATGGC 11363 >seq503 Length=27307 Score = 98.7 bits (108), Expect = 3e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 65848 AACTGCACGACCATTCCTTGTGCGTTACGAATCGTTCCGTCATAATTGCACATATTATCT 65907 |||||||| || ||| | | |||||| | || ||||| || ||| ||| ||| Sbjct 17010 AACTGCACAACGTCGCCTAGGGAGTTACGGACGGTACCGTCGTACTTGGCCATGACTTCT 16951 Query 65908 TCACTTGCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTA 65967 ||| ||||||||| |||| |||||||||||||||| | | || || || || |||||| Sbjct 16950 TCAAGTGCCTTTACGAGACGACGCTGGATGTAACCAGTTTCGGCGGTCTTGACAGCGGTA 16891 Query 65968 TCAACGAGACCTTCACGCCCGGACATTGC 65996 |||| ||||||||||| || | ||| || Sbjct 16890 TCAATCAGACCTTCACGACCAGCCATGGC 16862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303331022657264