Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1343 105 5e-18 seq283 96.9 3e-15 seq568 86.0 5e-12 >seq1343 Length=2062 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | |||||| || ||||||||||| |||||||| ||| | Sbjct 1704 CCTCCACGGAGGCGGAGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTC 1763 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||||||||| ||||| ||| |||| || ||||| ||||| || Sbjct 1764 AGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGG 1823 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || |||| ||| || | | | | ||||| || ||| Sbjct 1824 ATGCCCTCCTTGTCCTGGATCTTTG--ACTTGACATTGTCGATGGTGTCCGAGGCCTCGA 1881 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || || || || ||||| || || ||||| Sbjct 1882 CCTCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || || || | ||| || || || || ||||| |||||||||||| | Sbjct 336 CCACCACGAAGTCTAAGCACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTC 395 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | ||| || || || | || || ||||||||||| || Sbjct 396 AAGGTGCGACCCTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGG 455 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | | ||||| || |||| | Sbjct 456 ATACCCTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACT 515 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| |||| |||||||||||||||||||| Sbjct 516 TCGAGGGTGATGGTCTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 562 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | || |||| || || || || |||||||| || |||||||| Sbjct 1020 CCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTG 1079 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||||||||| || || ||| | || || || |||||||| ||| Sbjct 1080 AGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGA 1139 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | |||||| | | | | |||||| || ||| Sbjct 1140 ATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACC 1199 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || || || ||||| |||||||||||||| Sbjct 1200 TCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || ||||||||||| || || ||||||||| | Sbjct 1248 CCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTC 1307 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||||||| || || || ||||||| ||||||||||| || Sbjct 1308 AGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGG 1367 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG-T 16887 | ||||| ||||| ||| | ||| || | | | ||||| | |||| || Sbjct 1368 ATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTC-CGAGGCTTCGAC 1426 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||||||||| || || || ||||| || || ||||||||| Sbjct 1427 CTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCATT 1475 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| ||| || || |||||||| || |||||||||||| | Sbjct 108 CCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 167 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| || | || || ||||||||||| ||| Sbjct 168 AAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGA 227 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| || | ||| || | | | | |||||| | ||| Sbjct 228 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACC 287 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| || || || || || || ||||||||||| ||||| Sbjct 288 TCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || |||||||||||||| |||||||| ||| || ||| | ||||| Sbjct 807 AGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCC 866 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| ||| || || || | || || || |||||||| ||| | ||||| ||||| Sbjct 867 TCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCT 926 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | || || | | | ||||| || ||| || | |||||| ||| Sbjct 927 TGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATAGTT 986 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| || ||||| Sbjct 987 TTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| ||| || || || ||||| || ||||||||||| | Sbjct 1476 CCACCACGAAGACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTC 1535 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||||| | ||| || || || |||| || ||||||||||| || Sbjct 1536 AGAGTGCGGTTGTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGG 1595 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || ||| || | | | | ||||| || |||| Sbjct 1596 ATACCCTCCTTGTCTTGGATCTTGGC--CTTGACGTTGTCAATGGTGTCTGAGGCCTCCA 1653 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| || || || ||||| || |||||||| Sbjct 1654 CCTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 >seq283 Length=1109 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | || | | |||||||| || Sbjct 989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGC 930 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | || | || ||||||||| || | ||||||||||| |||| Sbjct 929 TTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTA 870 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | || ||| | |||| |||| |||||||| ||||| ||| Sbjct 869 GCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTC 810 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| |||||||| Sbjct 809 AAGGTCTTAACAAATATCTGCAT 787 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| | | ||||||||||| ||||| || |||||||| || |||||||| || || Sbjct 786 CCCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGC 727 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | ||||| | || || || ||| | || |||| ||| || ||| || Sbjct 726 CAAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGG 667 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | |||||| || || ||||| ||| || | | | | || || | ||| Sbjct 666 GATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAAC 607 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||| || || || || || || || ||||||||||||||||| Sbjct 606 TTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 >seq568 Length=22718 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || || |||| || || || |||||||| || ||||||||||| | Sbjct 8828 CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 8769 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||||||||| || || || || | || || ||||| |||||| || Sbjct 8768 AGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 8709 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | | ||| || | | | | ||||| | ||| | Sbjct 8708 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACT 8649 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| || || || ||||| || |||||||| Sbjct 8648 TCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 8602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405081325162480