Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1343 104 2e-17 seq283 82.4 5e-11 >seq1343 Length=2062 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||||| ||||| || |||||| || || ||||| ||| Sbjct 564 CCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACTG 623 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || ||||||||||| || | || ||||| || | |||| Sbjct 624 AGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGG 683 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| ||||| ||| ||||| | || || || | || ||| Sbjct 684 ATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCACT 743 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | |||||||| ||||| |||||||| || ||||| |||||||| Sbjct 744 TCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || |||||| |||||| || |||||||| || || | || | || || Sbjct 1266 ACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCC 1325 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 ||||| || || || || || || || ||||| || | |||| || || |||||| | Sbjct 1326 AATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGA 1385 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||| ||| || |||| || || || ||| || || | || || |||||| Sbjct 1386 ATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGTTTTA 1445 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | |||||||||||| |||||||| Sbjct 1446 CCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || || || ||||||||||||||||| ||| | | || |||| || Sbjct 1038 ACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCC 1097 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 ||||| || || ||||| || || |||||||| || | || | || || |||||| | Sbjct 1098 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGA 1157 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||||||||| | | ||| ||| || || || | || || || || Sbjct 1158 ATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTG 1217 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | ||||||||| || |||||||| Sbjct 1218 CCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 >seq283 Length=1109 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| ||| |||||| || || ||||| |||| | | | | || || || || Sbjct 989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGC 930 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || ||||| || | | ||||| || | ||||| || ||||||||| ||||| Sbjct 929 TTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTA 870 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||||||| | | ||||| || || || || || || || || || || ||| Sbjct 869 GCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTC 810 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 ||||| || || ||||||||||| Sbjct 809 AAGGTCTTAACAAATATCTGCAT 787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334941680907512