Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1343 136 3e-27 seq283 134 1e-26 >seq1343 Length=2062 Score = 136 bits (150), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || |||||||| || || ||||||| ||||||||||| | || Sbjct 562 ATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTCG 503 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| |||| | ||| ||||| || || || ||||| ||||| Sbjct 502 GACACCATTGACAACGTCAAGTCAAAGATTCAA-GACAAGGAGGGTATCCCACCCGACCA 444 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || ||||| || ||| | || || | |||||| || |||| ||||| Sbjct 443 ACAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACAA 384 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || ||||||||||| || || ||| | ||||| || || Sbjct 383 CATCCAAAAAGAATCAACCCTTCATCTCGTGCTTAGACT 345 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | || |||||| ||||||| | || || || | || Sbjct 1475 AATGCAGATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCCTTGAGGTCGAAGCCTC 1416 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| |||||| | ||| |||| | ||| ||||| || || || || || |||| Sbjct 1415 GGACACCATCGAGAACGTCAAGTCAAAGATTCAG-GACAAGGAGGGTATCCCGCCAGACC 1357 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| ||||||| || || || ||||| || |||| ||||||| || |||| |||| Sbjct 1356 AACAGCGTCTTATTTTCGCTGGTAAGCAATTGGAGGATGGTCGCACTCTGAGCGACTACA 1297 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||| || || || ||||| || || || || ||| | || | ||||| Sbjct 1296 ATATCCAGAAGGAGTCCACTCTCCACTTGGTCCTACGTCTTCGTGGAGG 1248 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||||||| | || || ||||||||||| | || Sbjct 790 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACTCTCGAAGTGGAGGCTTCG 731 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| |||||| ||||| || || || || || |||| Sbjct 730 GACACGATCGA--CAATGTCAAGTCGAAAATCCAGGACAAGGAGGGCATCCCCCCAGACC 673 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || |||||||| || || | ||||||| ||||||| | | || |||| Sbjct 672 AACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAAGATGGTCGCACTCTCAGTGACTACA 613 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || || || || || || || || ||||| Sbjct 612 ACATCCAGAAGGAGTCAACCCTTCACTTGGTGCT 579 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || || ||||||| |||| || ||| | || Sbjct 1246 ATGCAGATTTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGGCCTCA 1187 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 1186 GACACTATTGACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATTCCTCCAGACCA 1128 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| || || ||||| || || | ||||||| | | || ||||| Sbjct 1127 ACAACGTCTGATCTTTGCTGGTAAGCAATTGGAGGACGGTCGCACTCTCAGTGACTACAA 1068 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||| ||||| || ||||| || || || | ||| | ||||| Sbjct 1067 TATTCAAAAGGAATCAACCCTACACTTGGTCCTCCGTCTACGTGGAGG 1020 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || ||||| | ||||| | || || ||| | || Sbjct 334 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAGACTATCACTCTTGAGGTCGAGGCTTCC 275 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| ||||| ||||| || |||||| Sbjct 274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGACCAA 215 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || || | || || || |||| ||||| Sbjct 214 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCTTGAGCGACTACAAC 155 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || || || || || || || ||||| ||| Sbjct 154 ATCCAGAAGGAGTCAACCCTCCATTTGGTG 125 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| |||||| | || Sbjct 1702 ATGCAGATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGGCCTCA 1643 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || || ||||| |||||| Sbjct 1642 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCAA 1583 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || || || ||| | || || | |||||| || | || ||||| Sbjct 1582 CAGCGTCTCATTTTCGCTGGTAAGCAACTCGAGGACAACCGCACTCTGAGTGACTACAAC 1523 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 ||||| || ||||| || || ||| | ||| Sbjct 1522 ATTCAGAAGGAATCAACTCTCCATCTGGTG 1493 >seq283 Length=1109 Score = 134 bits (148), Expect = 1e-26 Identities = 174/239 (73%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 24990 AACGGAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGT 25048 || |||||| |||||||| || || || ||| | || || || ||||||| | || || Sbjct 93 AATGGAACAGATGCAAATCTTCGTGAAAACTCTAACTGGCAAGACCATCACCCTTGAGGT 152 Query 25049 GGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108 ||| ||||||||||| || | ||| || ||| ||||| || || ||||| Sbjct 153 CGAGAGCTCTGACACTATTGATAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCC 212 Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168 || ||||| ||| || | |||||||| ||||| || | || |||| ||||| | | Sbjct 213 CCCGGACCAGCAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGC 272 Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||||| ||||||||||| ||| || || |||||||| ||||| |||||||||| Sbjct 273 TGATTACAACATTCAAAAAGAGAGCACTCTTCACTTAGTGCTCAGGCTGAGAGGAGGAA 331 Score = 114 bits (126), Expect = 1e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| | || || || | || || | || ||||| || Sbjct 330 AATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACTATTACCCTTGAGGTGGAAAGCTC 389 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||| || || || || ||| || ||| ||||| ||||| ||||| || ||| Sbjct 390 TGACACCATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAC 447 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| || | |||||||| || ||||| | || |||| || ||| ||| || ||| Sbjct 448 CAACAGAGGCTAATTTTTGCTGGGAAACAGCTTGAGGATGGCCGGACTTTGGCAGACTAC 507 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| || ||| | || || || ||||||||||| || Sbjct 508 AATATTCAGAAGGAAGCAACACTTCACTTAGTGCTAAGACT 548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433320859837880