Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 136 3e-27
seq283 134 1e-26
>seq1343
Length=2062
Score = 136 bits (150), Expect = 3e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || |||||||| || || ||||||| ||||||||||| | ||
Sbjct 562 ATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTCG 503
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| |||| | ||| ||||| || || || ||||| |||||
Sbjct 502 GACACCATTGACAACGTCAAGTCAAAGATTCAA-GACAAGGAGGGTATCCCACCCGACCA 444
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||||| | || || ||||| || ||| | || || | |||||| || |||| |||||
Sbjct 443 ACAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACAA 384
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|| ||||||||||| || || ||| | ||||| || ||
Sbjct 383 CATCCAAAAAGAATCAACCCTTCATCTCGTGCTTAGACT 345
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || || || || || | || |||||| ||||||| | || || || | ||
Sbjct 1475 AATGCAGATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCCTTGAGGTCGAAGCCTC 1416
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| |||||| | ||| |||| | ||| ||||| || || || || || ||||
Sbjct 1415 GGACACCATCGAGAACGTCAAGTCAAAGATTCAG-GACAAGGAGGGTATCCCGCCAGACC 1357
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| ||||||| || || || ||||| || |||| ||||||| || |||| ||||
Sbjct 1356 AACAGCGTCTTATTTTCGCTGGTAAGCAATTGGAGGATGGTCGCACTCTGAGCGACTACA 1297
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||| || || || ||||| || || || || ||| | || | |||||
Sbjct 1296 ATATCCAGAAGGAGTCCACTCTCCACTTGGTCCTACGTCTTCGTGGAGG 1248
Score = 123 bits (136), Expect = 2e-23
Identities = 157/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||||||||| | || || ||||||||||| | ||
Sbjct 790 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACTCTCGAAGTGGAGGCTTCG 731
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| |||||| ||||| || || || || || ||||
Sbjct 730 GACACGATCGA--CAATGTCAAGTCGAAAATCCAGGACAAGGAGGGCATCCCCCCAGACC 673
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| | || |||||||| || || | ||||||| ||||||| | | || ||||
Sbjct 672 AACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAAGATGGTCGCACTCTCAGTGACTACA 613
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || || || || || || || |||||
Sbjct 612 ACATCCAGAAGGAGTCAACCCTTCACTTGGTGCT 579
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || | || || || ||||||| |||| || ||| | ||
Sbjct 1246 ATGCAGATTTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGGCCTCA 1187
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || ||||| | || | ||| ||||| || || ||||| || |||||
Sbjct 1186 GACACTATTGACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATTCCTCCAGACCA 1128
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| || || ||||| || || | ||||||| | | || |||||
Sbjct 1127 ACAACGTCTGATCTTTGCTGGTAAGCAATTGGAGGACGGTCGCACTCTCAGTGACTACAA 1068
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||| ||||| || ||||| || || || | ||| | |||||
Sbjct 1067 TATTCAAAAGGAATCAACCCTACACTTGGTCCTCCGTCTACGTGGAGG 1020
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | || ||||| | ||||| | || || ||| | ||
Sbjct 334 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAGACTATCACTCTTGAGGTCGAGGCTTCC 275
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| ||||| ||||| ||||| || ||||||
Sbjct 274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGACCAA 215
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || |||||||| || | || || | || || || |||| |||||
Sbjct 214 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCTTGAGCGACTACAAC 155
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|| || || || || || || ||||| |||
Sbjct 154 ATCCAGAAGGAGTCAACCCTCCATTTGGTG 125
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || ||||||| |||| |||||| | ||
Sbjct 1702 ATGCAGATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGGCCTCA 1643
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| || ||| ||||| || || || ||||| ||||||
Sbjct 1642 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCAA 1583
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | ||||| || || || ||| | || || | |||||| || | || |||||
Sbjct 1582 CAGCGTCTCATTTTCGCTGGTAAGCAACTCGAGGACAACCGCACTCTGAGTGACTACAAC 1523
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
||||| || ||||| || || ||| | |||
Sbjct 1522 ATTCAGAAGGAATCAACTCTCCATCTGGTG 1493
>seq283
Length=1109
Score = 134 bits (148), Expect = 1e-26
Identities = 174/239 (73%), Gaps = 1/239 (0%)
Strand=Plus/Plus
Query 24990 AACGGAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGT 25048
|| |||||| |||||||| || || || ||| | || || || ||||||| | || ||
Sbjct 93 AATGGAACAGATGCAAATCTTCGTGAAAACTCTAACTGGCAAGACCATCACCCTTGAGGT 152
Query 25049 GGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108
||| ||||||||||| || | ||| || ||| ||||| || || |||||
Sbjct 153 CGAGAGCTCTGACACTATTGATAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCC 212
Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168
|| ||||| ||| || | |||||||| ||||| || | || |||| ||||| | |
Sbjct 213 CCCGGACCAGCAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGC 272
Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||||| ||||||||||| ||| || || |||||||| ||||| ||||||||||
Sbjct 273 TGATTACAACATTCAAAAAGAGAGCACTCTTCACTTAGTGCTCAGGCTGAGAGGAGGAA 331
Score = 114 bits (126), Expect = 1e-20
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| ||||| | || || || | || || | || ||||| ||
Sbjct 330 AATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACTATTACCCTTGAGGTGGAAAGCTC 389
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||| || || || || ||| || ||| ||||| ||||| ||||| || |||
Sbjct 390 TGACACCATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAC 447
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||| || | |||||||| || ||||| | || |||| || ||| ||| || |||
Sbjct 448 CAACAGAGGCTAATTTTTGCTGGGAAACAGCTTGAGGATGGCCGGACTTTGGCAGACTAC 507
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|||||||| || ||| | || || || ||||||||||| ||
Sbjct 508 AATATTCAGAAGGAAGCAACACTTCACTTAGTGCTAAGACT 548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433320859837880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |