Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq283 95.1 1e-14 seq1343 82.4 6e-11 >seq283 Length=1109 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/237 (69%), Gaps = 20/237 (8%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||||||||| ||||| | ||||| |||||||| || |||||||||||||| | | Sbjct 329 CCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAG-C 271 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || || | || || | |||||||| ||||| |||| | |||||| ||| || Sbjct 270 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 211 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC--- 34076 | | ||| |||||| || | ||| | ||| ||||| ||| || Sbjct 210 AATACCCTCCTTGTCC---------TGGATCTTGGCCTTGACATTATCAATAGTGTCAGA 160 Query 34077 GCATTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || |||||| || || || || || ||||| |||||||| ||||||||||| Sbjct 159 GCTCTCGACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| |||| || ||| |||| || || || ||||||||||||||||||||||||| Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || | || || | ||||| || ||||| ||||| | |||||||||| || Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666 Query 34021 ACGCTCTCTTTGTCCATAATTTTT 34044 | || ||| || ||| ||||||| Sbjct 665 ATGCCCTCCTTATCCTGAATTTTT 642 >seq1343 Length=2062 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| | || || || || ||||| || || |||||| || ||||||||||| || Sbjct 1703 ACCTCCACGGAGGCGGAGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATC-GC 1761 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || || |||| |||||||||||||| ||||| || || |||||||| || || Sbjct 1762 TCAGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCG 1821 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 1822 GGATGCCCTCCTTGTCC 1838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397055857404304