Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1343 140 8e-28 seq568 129 1e-24 seq283 120 7e-22 seq464 107 5e-18 >seq1343 Length=2062 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||||||| |||||||||| || |||||||||||| || |||||| Sbjct 336 CCACCACGAAGTCTAAGCACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTC 395 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | ||| ||||| |||||||| ||||||||||| |||| Sbjct 396 AAGGTGCGACCCTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGG 455 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || || || | || ||||| || || | || | || ||| Sbjct 456 ATACCCTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACT 515 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || |||| ||| ||||| || |||||||| Sbjct 516 TCGAGGGTGATGGTCTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 562 Score = 120 bits (132), Expect = 7e-22 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || || | |||| || || || ||||| || |||| Sbjct 560 CATG-CCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGT 618 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||| ||||| || ||||| | || ||||| || ||||||| ||||||||| | Sbjct 619 CACTGAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGG---T 675 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || || || || ||||||||||||| || || || || || | || | Sbjct 676 CTGGGGGGATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAG 735 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || || ||||| ||||||| ||||||||||| |||||||| Sbjct 736 CCTCCACTTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| ||||| ||| ||||| ||||| || ||||| || || || || Sbjct 1055 TTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAA 1114 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||||||| ||||| ||| || ||||| || || ||||| || || | ||||| Sbjct 1115 GATCAGACGTTGTTG---GTCTGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCAC 1171 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || | || || ||||| ||||| ||||| || || || || || Sbjct 1172 ATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTT 1231 Query 288459 GACGAATATCTGCAT 288473 || || |||||||| Sbjct 1232 CACAAAAATCTGCAT 1246 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| | || || ||||| || | || || || |||||| Sbjct 144 TCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 203 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||||||||||||| ||| || |||||||| || |||||||| || | || ||| Sbjct 204 ATCAGACGCTGTTG---GTCTGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTGACG 260 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || || || || ||||| ||||| || || ||||||||| Sbjct 261 TTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTG 320 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 321 ACAAAAATTTGCAT 334 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| || |||||||| || || ||| Sbjct 792 CCACCACGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTC 851 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| ||||| || | ||| || || |||||||||||||| ||||| ||| Sbjct 852 AGGGTGCGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTG---GTCTGGA 908 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || || || ||||| |||| ||| || || || || | || | || Sbjct 909 GGAATTCCCTCCTTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCG 968 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || || || |||||||| || || ||||| Sbjct 969 ACCTCTAGGGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| |||||| || ||||| || || || ||||| || || ||||| Sbjct 1284 TCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAA 1343 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||||||||| ||| ||||| || || || ||||| || || | || ||| Sbjct 1344 ATAAGACGCTGTTG---GTCTGGCGGGATACCCTCCTTGTCCTGAATCTTTGACTTGACG 1400 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | ||| || || || ||||| || || || || || || || Sbjct 1401 TTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTC 1460 Query 288460 ACGAATATCTGCATT 288474 ||||| ||||||||| Sbjct 1461 ACGAAGATCTGCATT 1475 Score = 96.9 bits (106), Expect = 8e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | | || ||||| | || ||| || || || || ||||| Sbjct 1475 TCCACCACGAAGACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACT 1534 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| ||| || | ||| || || ||||| || ||||||||||| ||| Sbjct 1535 CAGAGTGCGGTTGTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGG 1594 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || || ||||| || || || ||||| || || | || | || || Sbjct 1595 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGCCTCCAC 1654 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 1655 CTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 Score = 95.1 bits (104), Expect = 3e-14 Identities = 162/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || ||||| | || || |||||||| || || ||| Sbjct 1704 CCTCCACGGAGGCGGAGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTC 1763 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| ||||| || ||||| || || || || || |||||||| || ||||| Sbjct 1764 AGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGG---TCTGGC 1820 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || || |||||||| || | || || || || || | || | || Sbjct 1821 GGGATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCG 1880 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || || ||||| ||||| || || || ||||||||||| || ||||| ||| Sbjct 1881 ACCTCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGACGAAGATTTGCATGATG 1934 >seq568 Length=22718 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | |||||| || ||||| || || || ||||| |||||| Sbjct 8792 TCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAG 8733 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || ||||| || || || |||||||| |||| || ||||| Sbjct 8732 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 8673 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| ||||| | ||||| ||||| || || |||||||||||| Sbjct 8672 TCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACG 8613 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 8612 AAGATCTGCAT 8602 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||| ||| || ||||| || ||||||| | Sbjct 8600 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 8541 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || ||||||||||| ||||| || |||||| Sbjct 8540 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGG---TCTGGG 8484 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| |||| || || || || || | ||| ||| || Sbjct 8483 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCG 8424 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 8423 ACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 8374 >seq283 Length=1109 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| || || ||||| || ||||| ||| Sbjct 1013 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 954 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || || || || || || ||||||| | |||||| |||||| Sbjct 953 AGTGTCCTTCCATCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGTTGG---TCTGGG 897 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 ||||| ||||| ||||||||||| || ||||| || || || | |||| ||| Sbjct 896 GGGATTCCCTCTTTGTCCTGGATTTTAGCCTTCACATTGTCAATGGTATCGGAGCTC--- 840 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| || |||| ||||| || ||||||||||| Sbjct 839 TCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAATATCTGCAT 787 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || || | || || || || || | || || || || ||| Sbjct 749 TCCTTCTGAATGTTGTAATCTGCCAAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAG 690 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| ||| |||||| || || |||||||| ||||| || || || || Sbjct 689 ATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTG 630 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| || ||||| || || || |||||||| || ||||||||| Sbjct 629 TCAATGGTATCTGAGCTC---TCAACTTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTG 573 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 572 ACAAAAATCTGCAT 559 >seq464 Length=30461 Score = 107 bits (118), Expect = 5e-18 Identities = 249/369 (67%), Gaps = 6/369 (2%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 |||||||| |||||||| | | || |||||| |||| | || | | | ||||||| | Sbjct 19206 ACGATAGGTGTGATGAATTCCAGCAGGAACCCAGGAAGCTTAAGCAAACT-GGGAAACTG 19148 Query 326024 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081 || || || ||||| || | ||||| || ||| |||| || |||| |||| Sbjct 19147 GACT-TGCAAGAAGTTGATCAAAAGACCCTTGATATGACTTCCATCGTGATCCTGATCGG 19089 Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTT 326141 |||||||||||| ||| ||||| ||||| || ||| ||||| | || | || Sbjct 19088 TCATGATCATCAGATGGCCGTAGCGAAGACCCTTGGTATCTGTGTACTCCTTCTTGTGTT 19029 Query 326142 GAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG 326200 | || || | || || |||| | ||| |||||| ||||||||| || | || Sbjct 19028 GCAGTCCCATAAACTGCTTGATGTTCTG-AATTTCTGCGTTCTTCGAAATCTGATCGACT 18970 Query 326201 GATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGA 326260 ||||| ||||| |||||||| | || ||||| |||||||| || || || || | Sbjct 18969 GATGCGTCGCGAACGTTCAACATCTTACCACGCAGAGGGAAGACACCGAATAGATCCTGG 18910 Query 326261 CCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATG 326320 || || | | || || | |||||| | || || || || || || |||| ||| Sbjct 18909 TTAACAACAGCTCGTCCAGCAAGTGCAAGCATAGCAGCCGAGTCACCTTCTGTCAAGATG 18850 Query 326321 AGAGTGCAC 326329 ||||| ||| Sbjct 18849 AGAGTACAC 18841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179633965436656