Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 116 3e-21
seq568 87.8 2e-12
>seq1343
Length=2062
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| || || | |||||| | ||| || ||||| ||||| ||||| || || |||||
Sbjct 108 CCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 167
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || || | || || || ||| | |||| || || ||||| || |||
Sbjct 168 AAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGA 227
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|| ||||| || || || || || |||| || | || | ||||||||||| ||||||
Sbjct 228 ATTCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGCCTCGAC 286
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| | || || || || ||||| || ||||||||||||||
Sbjct 287 CTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | | || |||||||| || || ||||||||||| || ||||||
Sbjct 1701 ATACCTCCACGGAGGCGGAGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCG 1760
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| || |||||||| || || || | || | || |||||||| |||
Sbjct 1761 CTCAGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGC 1820
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| ||||| || || || || || ||| |||| || | |||||| || | ||||
Sbjct 1821 GGGATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCG 1880
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | || || || ||||| || || || || ||||||||
Sbjct 1881 ACCTCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| || || || || || ||||||||||| || |||||||| | ||| || ||
Sbjct 809 CACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTC 868
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|| ||| || || ||| | |||| ||||| ||||| || ||||| || || || |||||
Sbjct 869 CAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTG 928
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || ||| | || | |||||| || | |||||| || || || | |||||
Sbjct 929 GATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATAGTTTT 988
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || ||||| ||||||||
Sbjct 989 ACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || |||||||||||||| ||||| || || |||| || | || ||||||||
Sbjct 1044 TGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCCAATTGC 1103
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | |||| ||||| ||||| || ||||| || || || || ||||| ||
Sbjct 1104 TTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGAATCTTG 1163
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | ||||| || | |||||| ||||| || | || ||||| ||
Sbjct 1164 GACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCTGTG 1223
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| |||||||| |||||
Sbjct 1224 AGGGTTTTCACAAAAATCTGCAT 1246
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | | ||| | || || ||||| ||||| ||||| || || ||
Sbjct 561 ATGCCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCA 620
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|||| || | ||| || | || ||||| || | ||||| || || ||||| ||
Sbjct 621 CTGAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGG 680
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| ||||| || || || || ||||| |||| || | ||||| |||| |||
Sbjct 681 GGGATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCC 740
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||||| || || ||||| | || || || ||||| |||||
Sbjct 741 ACTTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790
>seq568
Length=22718
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | | || || || || || |||||||| ||||| || || |||
Sbjct 8375 ATACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCG 8316
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| | || || | || || || || | || | || ||||| |||||
Sbjct 8315 CTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGA 8256
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || ||||| || || |||| || | || | ||||||||| |||||
Sbjct 8255 GGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGA-CGTTGTCAATGGTGTCGGATGACTC 8197
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316
||| || || || | || ||||||||
Sbjct 8196 GACCTCAAGGGTGATGGTCTTGCCGGT 8170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451995561145920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |