Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1343 116 3e-21 seq568 87.8 2e-12 >seq1343 Length=2062 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| || || | |||||| | ||| || ||||| ||||| ||||| || || ||||| Sbjct 108 CCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 167 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | |||| || || ||||| || ||| Sbjct 168 AAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGA 227 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || ||||| || || || || || |||| || | || | ||||||||||| |||||| Sbjct 228 ATTCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGCCTCGAC 286 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| | || || || || ||||| || |||||||||||||| Sbjct 287 CTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | | || |||||||| || || ||||||||||| || |||||| Sbjct 1701 ATACCTCCACGGAGGCGGAGAACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCG 1760 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| || |||||||| || || || | || | || |||||||| ||| Sbjct 1761 CTCAGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGC 1820 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || || || || || ||| |||| || | |||||| || | |||| Sbjct 1821 GGGATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCG 1880 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || || ||||| || || || || |||||||| Sbjct 1881 ACCTCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGACGAAGATTTGCAT 1930 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| || || || || || ||||||||||| || |||||||| | ||| || || Sbjct 809 CACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTC 868 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 || ||| || || ||| | |||| ||||| ||||| || ||||| || || || ||||| Sbjct 869 CAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTG 928 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || ||| | || | |||||| || | |||||| || || || | ||||| Sbjct 929 GATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATAGTTTT 988 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||| |||||||| Sbjct 989 ACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || |||||||||||||| ||||| || || |||| || | || |||||||| Sbjct 1044 TGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCCAATTGC 1103 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | |||| ||||| ||||| || ||||| || || || || ||||| || Sbjct 1104 TTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGAATCTTG 1163 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | || | ||||| || | |||||| ||||| || | || ||||| || Sbjct 1164 GACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCTGTG 1223 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || ||||| |||||||| ||||| Sbjct 1224 AGGGTTTTCACAAAAATCTGCAT 1246 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | ||| | || || ||||| ||||| ||||| || || || Sbjct 561 ATGCCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCA 620 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 |||| || | ||| || | || ||||| || | ||||| || || ||||| || Sbjct 621 CTGAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGG 680 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || || || || ||||| |||| || | ||||| |||| ||| Sbjct 681 GGGATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCC 740 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||||| || || ||||| | || || || ||||| ||||| Sbjct 741 ACTTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 >seq568 Length=22718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || || |||||||| ||||| || || ||| Sbjct 8375 ATACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCG 8316 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| | || || | || || || || | || | || ||||| ||||| Sbjct 8315 CTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGA 8256 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || ||||| || || |||| || | || | ||||||||| ||||| Sbjct 8255 GGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGA-CGTTGTCAATGGTGTCGGATGACTC 8197 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316 ||| || || || | || |||||||| Sbjct 8196 GACCTCAAGGGTGATGGTCTTGCCGGT 8170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451995561145920