Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq568 138 1e-27 seq1343 116 4e-21 seq283 105 8e-18 seq190 93.3 5e-14 >seq568 Length=22718 Score = 138 bits (152), Expect = 1e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| ||||| || | || || ||||||||||| ||||| Sbjct 8564 TCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAG 8505 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||||||| | || | || |||||||||| ||||||| ||||| | Sbjct 8504 ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 8445 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||| || || || | |||||||| ||||| || || || || || Sbjct 8444 TCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACG 8385 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 8384 AAGATCTGCAT 8374 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || |||| || | |||||| |||||||| Sbjct 8793 CTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAA 8734 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||||||| ||||||| ||||| ||| Sbjct 8733 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 8675 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| |||||||| |||| |||||||| || || || || || || | Sbjct 8674 TGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGA 8615 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 8614 CGAAGATCTGCAT 8602 Score = 98.7 bits (108), Expect = 1e-15 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||| || ||||| |||| |||||||||||||| || || Sbjct 8336 TCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAG 8277 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||| || | || | || |||||||| |||||| |||||| ||| Sbjct 8276 ATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGA-CGTT 8218 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | |||||| || || || || | |||||||| ||||| || Sbjct 8217 GTCAATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 8170 >seq1343 Length=2062 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||||||||||| ||| | || |||||| ||||| ||||||||| Sbjct 108 CCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 167 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || |||| || ||||||||||||||||| |||| ||||| ||||| | || Sbjct 168 AAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGA 227 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | ||||||||| |||||| ||||| ||| | | | |||||| | || || Sbjct 228 ATTCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGCCTCGAC 286 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || || ||||| || || || ||||| |||||||| Sbjct 287 CTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||||||||| | || ||||| || || |||||||| |||||||| | Sbjct 1487 ACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTCAGAGTGCGGTT 1546 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||| ||||| || ||||| || | ||||| ||||||| || | | |||||| Sbjct 1547 GTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTT 1606 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| |||||| ||||| ||| | | | ||||| | ||||| || | |||| Sbjct 1607 GTCTTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGGCCTCCACCTCGAGGGTGA 1665 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || ||||| || || || || ||||| ||||| Sbjct 1666 TGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||||||||| ||||| ||| || ||||| |||| || Sbjct 1722 ACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCC 1781 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||||| || || || | ||||||||||| | ||| | || |||||||||| | Sbjct 1782 AATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 1841 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | ||||| | || || || | |||||||| || Sbjct 1842 ATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTTA 1901 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||||||||| Sbjct 1902 CCAGTTAGGGTCTTGACGAAGATTTGCAT 1930 Score = 105 bits (116), Expect = 8e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||||||| |||||||| | || || | ||||| || ||||| Sbjct 1283 CTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCCAATTGCTTACCAGCGAA 1342 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| ||||| | ||| | | |||||||||| ||||| ||||| | Sbjct 1343 AATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTT 1402 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| | ||| || || | ||||||||||| || || || ||||| || Sbjct 1403 CTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCAC 1462 Query 46582 AAAGATTTGCATT 46594 ||||| |||||| Sbjct 1463 GAAGATCTGCATT 1475 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | || ||| | ||||| || | || |||||| ||||| |||||||| Sbjct 562 TGCCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAC 621 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 |||||||| | || ||||||||||| ||||| || ||||| ||||| ||||| | | Sbjct 622 TGAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGG 681 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| ||| ||| ||||| | | | |||||| | |||| Sbjct 682 GGATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCA 741 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | || || || || || |||| || || || || || ||||| Sbjct 742 CTTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | || |||||||||||| ||||| ||| || ||||| | Sbjct 803 ACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCC 862 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || || ||||| |||||||| |||| || || ||||| | || | | |||||| Sbjct 863 GTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTT 922 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||||| || | | | | ||||| | || || || | ||||| Sbjct 923 GTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGAT 982 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || |||||||||||||| Sbjct 983 AGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 >seq283 Length=1109 Score = 105 bits (116), Expect = 8e-18 Identities = 144/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || ||||| ||||| || ||||| || | || ||||| | || || ||||||||||| Sbjct 299 GTGCTCTCTTTTTGAATGTTGTAATCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 240 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || || ||||| | ||||||||| | || | | |||||||||| |||||| |||| Sbjct 239 GCAAAAATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTG 180 Query 46517 AGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 | | | | ||||| |||| || || || | |||||||| ||||| || || Sbjct 179 ACATTATCAATAGTGTCAGAGCTC---TCGACCTCAAGGGTGATGGTCTTGCCAGTTAGA 123 Query 46574 GTTTTAACAAAGATTTGCAT 46593 ||||| || ||||||||||| Sbjct 122 GTTTTCACGAAGATTTGCAT 103 >seq190 Length=38570 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||||||||| || || || | || |||||||||||||| Sbjct 36084 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCA 36143 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||| |||| |||||| ||||| | || | | ||||||||| Sbjct 36144 GCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 36187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565228847471040