Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1343 150 2e-31 seq568 120 3e-22 seq283 87.8 2e-12 seq190 87.8 2e-12 >seq1343 Length=2062 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || ||||||||| |||| || |||||| | Sbjct 1702 ATGCAGATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGGCCTCA 1643 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || ||||||| Sbjct 1642 GACACCATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCA 1584 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||||| ||| || || || || || ||| | ||||| || | |||||||| Sbjct 1583 ACAGCGTCTCATTTTCGCTGGTAAGCAACTCGAGGACAACCGCACTCTGAGTGACTACAA 1524 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || |||||| | || || ||| ||||| ||||| Sbjct 1523 CATTCAGAAGGAATCAACTCTCCATCTGGTGTTGCGT 1487 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || ||||| |||||| | || ||||||||| | Sbjct 1018 ATGCAAATCTTTGTCAAGACACTCACTGGTAAAACTATCACCCTAGAGGTCGAGGCCTCA 959 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | ||| || |||| ||||| ||||||||||| | |||||| Sbjct 958 GACACCATCGATAATGTAAAATCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAA 899 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | ||| || || || ||||| |||| |||||||| | ||| |||||| Sbjct 898 CAACGTCTGATCTTCGCCGGTAAGCAACTGGAGGACGGCCGCACCCTGAGCGATTACAAC 839 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || || ||||||| ||| || | || || Sbjct 838 ATCCAAAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGCGTGGTGG 792 Score = 141 bits (156), Expect = 9e-29 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || |||||||| || || ||||| | || |||||||| || Sbjct 334 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAGACTATCACTCTTGAGGTCGAGGCTTCC 275 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| || |||||||| | ||||| Sbjct 274 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGACCA 216 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| ||||| ||||| || |||| || ||| | | ||||||||| Sbjct 215 ACAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCTTGAGCGACTACAA 156 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||||||||| ||||| Sbjct 155 CATCCAGAAGGAGTCAACCCTCCATTTGGTGTTGCGT 119 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || |||||||| | || ||||||||| | Sbjct 1930 ATGCAAATCTTCGTCAAGACCCTAACTGGTAAGACCATCACTCTTGAGGTCGAGGCCTCG 1871 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||| | | | | | || ||| |||| ||||| ||||| || |||||| ||||| Sbjct 1870 GACACCATCGACAATGTCAAGTCAAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACCA 1812 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| || ||||| || |||| |||| |||||||| | ||| ||||| Sbjct 1811 GCAGCGTCTCATTTTTGCTGGCAAGCAATTGGAGGACGGCCGCACCCTGAGCGATTACAA 1752 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||||| | || |||||| | || || || Sbjct 1751 CATCCAAAAGGAGTCTACCCTGCATCTTGTTCTCCG 1716 Score = 132 bits (146), Expect = 5e-26 Identities = 164/219 (75%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| ||||| || |||||||||||| | || ||||| ||| | Sbjct 1475 AATGCAGATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCCTTGAGGTCGAAGCCTC 1416 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 |||| | | | |||| | || ||| || | ||||| ||||| || |||||| ||| Sbjct 1415 GGACACCATCGAGAACG-TCAAGTCAAAGATTCAGGACAAGGAGGGTAT-CCCGCCAGAC 1358 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| || |||| ||| || || || |||| || | ||||| || | ||||||| Sbjct 1357 CAACAGCGTCTTATTTTCGCTGGTAAGCAATTGGAGGATGGTCGCACTCTGAGCGACTAC 1298 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||| ||||| | || || || ||||| || ||| Sbjct 1297 AATATCCAGAAGGAGTCCACTCTCCACTTGGTCCTACGT 1259 Score = 125 bits (138), Expect = 7e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| | || || || ||||||||| |||| || |||||| | Sbjct 562 ATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTCG 503 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || ||| || | ||||| ||||| || || ||||||| Sbjct 502 GACACCATTGACAACG-TCAAGTCAAAGATTCAAGACAAGGAGGGTATCCCACCCGACCA 444 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || || || || || || | |||||| | | ||||||||| Sbjct 443 ACAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACAA 384 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||||||| ||| | || || ||| | ||||| Sbjct 383 CATCCAAAAAGAATCAACCCTTCATCTCGTGCT 351 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| ||||| ||||||||| |||| ||||||||| | Sbjct 1246 ATGCAGATTTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGGCCTCA 1187 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | ||||| ||||||||||| | |||||| Sbjct 1186 GACACTATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCAA 1127 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || || || |||| |||| ||||| |||| |||||||| Sbjct 1126 CAACGTCTGATCTTTGCTGGTAAGCAATTGGAGGACGGTCGCACTCTCAGTGACTACAAT 1067 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||||||| | || || || ||||| || ||| Sbjct 1066 ATTCAAAAGGAATCAACCCTACACTTGGTCCTCCGT 1031 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || || || || |||| || ||||| | Sbjct 790 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACTCTCGAAGTGGAGGCTTCG 731 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || ||||||| ||||| ||||| || ||| | |||||| Sbjct 730 GACACGATCGACAATGTCAAGTCGAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCAA 671 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || || || ||||| || || | ||||| |||| ||||||||| Sbjct 670 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAAGATGGTCGCACTCTCAGTGACTACAAC 611 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || |||||||| ||| Sbjct 610 ATCCAGAAGGAGTCAACCCTTCACTTGGTGCTCCGT 575 >seq568 Length=22718 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| | || |||||| | || Sbjct 8374 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 8433 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| |||||| | ||||| Sbjct 8434 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 8493 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 8494 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 8553 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || | || || ||| Sbjct 8554 ATCCAGAAGGAATCCACTCTCCACCTCGTCCTCCGT 8589 Score = 114 bits (126), Expect = 1e-20 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || |||||| | |||||| | | | |||| | || Sbjct 8168 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACCATTGACAACG--TCAA 8225 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| ||||| || || ||||| | || || ||||| ||||| | || || Sbjct 8226 GAGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCTGG 8285 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| | ||||||||||||||| |||||| | || || Sbjct 8286 CAAGCAGCTCGAGGACGGTCGCACCCTTAGCGACTACAACATCCAGAAGGAATCCACTCT 8345 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 8346 CCACCTCGTCCTCCGT 8361 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| | || || || | | Sbjct 8602 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 8661 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| || ||| | ||||| Sbjct 8662 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 8720 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||| |||| |||| || || ||| |||||||| Sbjct 8721 GCAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAA 8780 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| | || || || |||||||| Sbjct 8781 CATCCAGAAGGAGTCAACCCTCCACTTGGTGCT 8813 >seq283 Length=1109 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || | || || || |||||||| | || || ||| | || Sbjct 787 ATGCAGATATTTGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTGGAGAGCTCC 846 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | ||||||| |||||||||||||| ||| | |||||| Sbjct 847 GATACCATTGACAATGTGAAGGCTAAAATCCAGGACAAAGAGGGAATCCCCCCAGACCAA 906 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||| |||| || | | || ||| ||||||||| Sbjct 907 CAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGAAGGACACTCGCTGACTACAAC 966 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 967 ATCCAGAAGGA 977 >seq190 Length=38570 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||||||||| || || | ||| ||||| ||||| || Sbjct 36187 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 36128 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || | || |||||| ||||||||||||||| ||||| Sbjct 36127 GATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGA 36090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500164347079680