Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq701 102 7e-16 seq1343 86.0 5e-11 >seq701 Length=14942 Score = 102 bits (112), Expect = 7e-16 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || ||||| || || ||||| || || || ||||| || ||||| || | ||| Sbjct 13066 ACTGTTCCCGCATACTTCAACGACTCTCAGCGCCAGGCTACCAAGGATGCCGGTCTGATT 13125 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || || || || ||||||||||| || ||||| || ||||| |||| ||||| Sbjct 13126 GCTGGCCTCAACGTCCTCCGTATTATCAACGAGCCTACCGCCGCTGCCATTGCCTATGGT 13185 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||| || | ||| || | || || |||||||| ||| ||| ||| Sbjct 13186 CTTGACAAGAAGGTTGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 13239 >seq1343 Length=2062 Score = 86.0 bits (94), Expect = 5e-11 Identities = 157/223 (70%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCT-AGAGTT 563313 |||||||| || || |||||||| ||| ||||| || |||||||| ||| || || Sbjct 801 AGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGG--ATGTTGTAATC-GCTCAGGGTG 857 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | || || ||||| || ||||| || || || | ||| || || ||||||||||| Sbjct 858 CGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCC 917 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || || ||||| || || |||||| || || || || | | | | | || || Sbjct 918 TCCTTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAG-GCCTCGACCTCTAG 976 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | |||||||||||| || || || || || ||||||||| Sbjct 977 GGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCATA 1019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029224500142480