Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1343 131 1e-25 seq283 114 1e-20 >seq1343 Length=2062 Score = 131 bits (144), Expect = 1e-25 Identities = 173/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || ||| | || || || ||||| ||||| ||||| |||||||| || | Sbjct 1020 CCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTG 1079 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | || |||||||||||||| ||||| |||| ||| ||||| || || ||| Sbjct 1080 AGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGA 1139 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || ||||| || || ||| | || | |||||| || | || || Sbjct 1140 ATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACC 1199 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || || |||| || ||||| || | ||||| ||||| |||||||| | | |||||| Sbjct 1200 TCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCATACCTCCACGAAGA 1259 Score = 122 bits (134), Expect = 7e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||||||||| || ||||| ||| | || | | || || | ||| Sbjct 359 ATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCCTCCTCGAGTTG 418 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || || | ||||||||| ||||| || || || || || |||||||| || Sbjct 419 CTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCTT 478 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || || | || | ||||| || | |||||||| || |||| || || || || Sbjct 479 TGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGT 538 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 |||||||| ||||| ||||||||| Sbjct 539 CAAAGTTTTGACAAAAATCTGCATG 563 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||||| || || || || || || || || || |||||||| ||| Sbjct 1248 CCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTC 1307 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| |||||||||||||| || || || | ||||||||| || ||||| Sbjct 1308 AGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGG 1367 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || ||||| ||| || || | || | ||||| || | ||| || Sbjct 1368 ATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACC 1427 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| ||||| || || | ||||| || || |||||||| Sbjct 1428 TCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| |||||||| || ||||| || ||||||||| | || | | | || || Sbjct 1721 AACAAGATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTC 1780 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||||||| || ||||| || | |||||| || || ||||| ||||| || || || || Sbjct 1781 CAATTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 1840 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || ||| || ||| | || | ||||| || | || || |||||||||| || || Sbjct 1841 GATCTTTGACTTGACATTGTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTT 1900 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || |||| || || || || || |||||| Sbjct 1901 ACCAGTTAGGGTCTTGACGAAGATTTGCATG 1931 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||| | || || |||||||| || || || || || ||||| || | Sbjct 564 CCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACTG 623 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | ||||| || ||||| |||||||||||||| || || || Sbjct 624 AGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGG 683 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || || ||||| || ||| | || | ||||| || | |||||| Sbjct 684 ATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCACT 743 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | || || ||||| || || || || || |||||||| Sbjct 744 TCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 >seq283 Length=1109 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| || |||| || || |||| ||||| ||| Sbjct 989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGC 930 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| ||||| | |||||| || || || || || ||||| || || ||||| Sbjct 929 TTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTA 870 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || || | ||||| || | ||||| || || || || Sbjct 869 GCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTC 810 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || |||||||||||||| Sbjct 809 AAGGTCTTAACAAATATCTGCAT 787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396271870322664