Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1343 125 5e-24 seq283 105 5e-18 seq568 100 2e-16 >seq1343 Length=2062 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | ||||| ||||| || || |||||||||||||| ||| Sbjct 1020 CCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTG 1079 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| |||| ||||| |||||||| ||||| ||||| || ||||| || | ||| Sbjct 1080 AGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGA 1139 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||| || ||| | | || ||||| ||||| ||| Sbjct 1140 ATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACC 1199 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || || || || | ||||| |||||||||||||| Sbjct 1200 TCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| || | |||||| || || || ||| || || || ||||| ||| Sbjct 563 GCCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACT 622 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | ||| | || || | |||||| |||||||| |||| |||||||| || | ||| Sbjct 623 GAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGG 682 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| || || || ||| | | | || || |||||||| Sbjct 683 GATGCCCTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCAC 742 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || ||||| || || || ||||||||||| Sbjct 743 TTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| ||||| || |||||||| || | || Sbjct 801 AGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGG 860 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| ||||||||||| || ||||| || ||||| || | |||| |||||| Sbjct 861 CCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCC 920 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||||||| | | | | ||||| ||||| ||||| | || Sbjct 921 TTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTG 980 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || ||||| || ||||| Sbjct 981 ATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||| || ||||| || | | ||| | || || | ||||| ||||| || Sbjct 372 TCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCCTCCTCGAGTTGCTTTCCGGCGAAG 431 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || |||||||| || | || | ||||||||||| ||||||| || || Sbjct 432 ATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCTTTGACTTGACGTTG 491 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || |||||||| || | || || || ||||| ||||||||||| ||| Sbjct 492 TCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGTCAAAGTTTTGACA 551 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 552 AAAATCTGCAT 562 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||| ||| || || || || ||||| ||||| ||| ||| | || Sbjct 1485 AGACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTCAGAGTGCGG 1544 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | ||| || | |||||||| || || || || |||||||| || | || | |||||| Sbjct 1545 TTGTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGGATACCCTCC 1604 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | ||||| ||||||||||| | || Sbjct 1605 TTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGCCTCCACCTCGAGGGTG 1664 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| | || || || || |||||||| Sbjct 1665 ATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || |||||||| || ||| | ||| | || ||| Sbjct 1266 ACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCATCCTCC 1325 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || |||||||| || || || || |||||||| || | || | ||||||||||| | Sbjct 1326 AATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTTGTCCTGA 1385 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || || | | | || || || || ||||| | || || ||||| Sbjct 1386 ATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGATGGTTTTA 1445 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||||| || || |||||||| Sbjct 1446 CCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||||||| || || ||| || || || ||||| || | | || Sbjct 117 AGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGG 176 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| ||||| || ||||| |||||||| || | |||| || ||| Sbjct 177 CCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCC 236 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || ||||| ||||| | || Sbjct 237 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTG 296 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | ||| || |||||||| ||||| Sbjct 297 ATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 >seq283 Length=1109 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| | ||| || || || ||||||||||||||||| |||||||||| Sbjct 329 CCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCA 270 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| |||| | ||| || |||| |||| Sbjct 269 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGA 210 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| || ||| | | | || || || ||| ||| Sbjct 209 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGACC 150 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | |||||| || || || |||||| Sbjct 149 TCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCATC 102 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | || || ||||| || || || ||| || ||||| |||||||| | Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || | ||||||||| ||||| ||||| | ||| ||||||| || Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||| || ||| ||| || ||| | | | ||||| ||| || Sbjct 665 ATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACT 606 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || |||||||||||||| Sbjct 605 TCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 >seq568 Length=22718 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || || || ||| || || || ||||| ||||| || | ||| |||| || Sbjct 8811 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTC 8752 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||||||||| ||||| || ||||| ||||| || |||| ||| | ||||||||||| Sbjct 8751 CAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 8692 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||| || || | | | ||||| | ||||| |||| || || || || Sbjct 8691 GATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTT 8632 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || | ||| || || || |||||||| Sbjct 8631 TCCAGTAAGAGTCTTGACGAAGATCTGCAT 8602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380931323100696