Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq283 125 5e-23 seq1343 104 2e-16 >seq283 Length=1109 Score = 125 bits (138), Expect = 5e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | || || | |||||||| ||| || || ||| || || || | ||| Sbjct 552 ACGAAGTCTTAGCACTAAGTGAAGTGTTGCTTCCTTCTGAATATTGTAGTCTGCCAAAGT 493 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| ||||| || || ||||||||||| || | ||||| || |||||||| || Sbjct 492 CCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGAGGAATACC 433 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| |||||| ||||| || |||| | | ||||| Sbjct 432 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGCTTTCCACCTCAAG 373 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| || || ||||| |||||||| ||||| || Sbjct 372 GGTAATAGTCTTTCCAGTGAGGGTCTTAACAAAAATCTG 334 Score = 104 bits (114), Expect = 2e-16 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 480570 TGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGC 480629 ||||| || || ||||| || || |||||||| || || | | ||| ||||| ||| Sbjct 305 TGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCAAGGGTGCGGCCATCCTCAAGCTGC 246 Query 480630 TTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689 || ||||||||||| | | || || || || ||||| || |||||||| || ||||| Sbjct 245 TTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTG 186 Query 480690 TGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGT 480748 |||||| |||||||| |||| | | | | |||||||| || || || || || Sbjct 185 GCCTTGACATTATCAATAGTGTCAGAGCTCTCGA-CCTCAAGGGTGATGGTCTTGCCAGT 127 Query 480749 GAGAGTCTTAACGAAAATTTG 480769 ||||| || ||||| ||||| Sbjct 126 TAGAGTTTTCACGAAGATTTG 106 Score = 100 bits (110), Expect = 2e-15 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||| ||||| |||||||| || || | || ||||| || || || || ||||| Sbjct 714 ATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTT 655 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 || ||||| ||| |||||| ||||| ||||| | | | | || || ||||||||| Sbjct 654 ATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACTT-CAAGGGTAA 596 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || ||||||||||| || ||||| || Sbjct 595 TTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTG 562 >seq1343 Length=2062 Score = 104 bits (114), Expect = 2e-16 Identities = 159/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCT-AG 480607 ||| |||||||| || || ||||| || ||| ||| || || ||||| ||| || Sbjct 797 ACGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATG--TTGTAATC-GCTCAG 853 Query 480608 AGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAAT 480667 || | | || || |||||||| || || || || ||||||||||| || |||||||| Sbjct 854 GGTGCGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAAT 913 Query 480668 TCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTC 480727 ||| ||||||||||| ||||| ||| ||| || || || || | | || Sbjct 914 TCCCTCCTTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTC 973 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||||||||| ||||| ||||| || || ||||| Sbjct 974 TAGGGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTG 1015 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || | || || || ||| || || ||| || ||| ||||| Sbjct 1025 ACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGT 1084 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || || | |||||| |||||||| || ||||||||||| || ||||||||||| Sbjct 1085 GCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCC 1144 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| |||||||| || ||| |||||||| || | | || || Sbjct 1145 CTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAG 1204 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || ||||| || || || ||||| || Sbjct 1205 GGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTG 1243 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| | || ||||| || || ||| || || || || ||| ||||| Sbjct 1481 ACGAAGACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTCAGAGT 1540 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || |||||||| ||||| ||||| ||||| ||||| || || || || || Sbjct 1541 GCGGTTGTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGGATACC 1600 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||||| ||||| ||||| ||||| || || | | || || Sbjct 1601 CTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGCCTCCACCTCGAG 1660 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || ||||| ||||| ||||| || || Sbjct 1661 GGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTG 1699 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || | |||||| ||||| ||||||||||| ||||| || || || || || ||||| Sbjct 1319 ATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTT 1378 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| ||||||||| ||||| || || || || | | | |||||||| || Sbjct 1379 GTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGAT 1438 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| ||||| || || ||||| || || Sbjct 1439 GGTTTTACCAGTGAGGGTTTTCACGAAGATCTG 1471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268121206160096