Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq283 125 5e-23
seq1343 104 2e-16
>seq283
Length=1109
Score = 125 bits (138), Expect = 5e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| | || || | |||||||| ||| || || ||| || || || | |||
Sbjct 552 ACGAAGTCTTAGCACTAAGTGAAGTGTTGCTTCCTTCTGAATATTGTAGTCTGCCAAAGT 493
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| ||||| || || ||||||||||| || | ||||| || |||||||| ||
Sbjct 492 CCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGAGGAATACC 433
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||||||| ||||| |||||| ||||| || |||| | | |||||
Sbjct 432 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGCTTTCCACCTCAAG 373
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||||||| || || ||||| |||||||| ||||| ||
Sbjct 372 GGTAATAGTCTTTCCAGTGAGGGTCTTAACAAAAATCTG 334
Score = 104 bits (114), Expect = 2e-16
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 480570 TGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGC 480629
||||| || || ||||| || || |||||||| || || | | ||| ||||| |||
Sbjct 305 TGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCAAGGGTGCGGCCATCCTCAAGCTGC 246
Query 480630 TTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689
|| ||||||||||| | | || || || || ||||| || |||||||| || |||||
Sbjct 245 TTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTG 186
Query 480690 TGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGT 480748
|||||| |||||||| |||| | | | | |||||||| || || || || ||
Sbjct 185 GCCTTGACATTATCAATAGTGTCAGAGCTCTCGA-CCTCAAGGGTGATGGTCTTGCCAGT 127
Query 480749 GAGAGTCTTAACGAAAATTTG 480769
||||| || ||||| |||||
Sbjct 126 TAGAGTTTTCACGAAGATTTG 106
Score = 100 bits (110), Expect = 2e-15
Identities = 116/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| ||||| ||||| |||||||| || || | || ||||| || || || || |||||
Sbjct 714 ATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTT 655
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735
|| ||||| ||| |||||| ||||| ||||| | | | | || || |||||||||
Sbjct 654 ATCCTGAATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACTT-CAAGGGTAA 596
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || ||||||||||| || ||||| ||
Sbjct 595 TTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTG 562
>seq1343
Length=2062
Score = 104 bits (114), Expect = 2e-16
Identities = 159/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCT-AG 480607
||| |||||||| || || ||||| || ||| ||| || || ||||| ||| ||
Sbjct 797 ACGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATG--TTGTAATC-GCTCAG 853
Query 480608 AGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAAT 480667
|| | | || || |||||||| || || || || ||||||||||| || ||||||||
Sbjct 854 GGTGCGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAAT 913
Query 480668 TCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTC 480727
||| ||||||||||| ||||| ||| ||| || || || || | | ||
Sbjct 914 TCCCTCCTTGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTC 973
Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| ||||||||||| ||||| ||||| || || |||||
Sbjct 974 TAGGGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTG 1015
Score = 93.3 bits (102), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | || || || ||| || || ||| || ||| |||||
Sbjct 1025 ACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGT 1084
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| || || | |||||| |||||||| || ||||||||||| || |||||||||||
Sbjct 1085 GCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCC 1144
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||| |||||||| || ||| |||||||| || | | || ||
Sbjct 1145 CTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAG 1204
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || || ||||| || || || ||||| ||
Sbjct 1205 GGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTG 1243
Score = 93.3 bits (102), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| | || ||||| || || ||| || || || || ||| |||||
Sbjct 1481 ACGAAGACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTCAGAGT 1540
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || |||||||| ||||| ||||| ||||| ||||| || || || || ||
Sbjct 1541 GCGGTTGTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGGATACC 1600
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||||| ||||| ||||| ||||| || || | | || ||
Sbjct 1601 CTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGCCTCCACCTCGAG 1660
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || || ||||| ||||| ||||| || ||
Sbjct 1661 GGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTG 1699
Score = 91.5 bits (100), Expect = 1e-12
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || | |||||| ||||| ||||||||||| ||||| || || || || || |||||
Sbjct 1319 ATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTT 1378
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| ||||||||| ||||| || || || || | | | |||||||| ||
Sbjct 1379 GTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGAT 1438
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||||| ||||| || || ||||| || ||
Sbjct 1439 GGTTTTACCAGTGAGGGTTTTCACGAAGATCTG 1471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268121206160096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |