Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq283 109 1e-18 seq1343 87.8 4e-12 >seq283 Length=1109 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || |||| | ||| | | |||| ||||| || || ||||||||||| || || Sbjct 969 GATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGCTTCCCAGCAAAGATCAACCT 910 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||| || || || ||||| ||||| || || |||||| || ||||| || | Sbjct 909 CTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTCACATTGTCAATGGT 850 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || || || || | ||| ||||| || ||||| || || |||| ||||||||| Sbjct 849 ATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAATATCTG 790 Query 192534 CAT 192536 ||| Sbjct 789 CAT 787 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 192327 TACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATC 192386 ||| || || | ||| | ||| || || || ||||| | || || || |||| || Sbjct 768 TACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCCAAGGTACGACCATCCTC 709 Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 | || |||||||||||||| | ||||| ||||| ||||| || || || ||||| || Sbjct 708 AAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTTATCCTG 649 Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506 ||||| || ||||| || | |||||| || ||||| || ||||| || || Sbjct 648 AATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACTTCAAGGGTAATTGTCTT 589 Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || || | ||| |||||||| Sbjct 588 CCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 >seq1343 Length=2062 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | |||||||| || || || | ||| | ||| || |||||| || || Sbjct 1245 ATACCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCG 1304 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || |||| |||||||| |||||||| || || | | |||||| || || Sbjct 1305 CTCAGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGC 1364 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || || || || || | || || | ||| Sbjct 1365 GGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCG 1424 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || || |||||||||||||| | ||||| | || ||||||||| Sbjct 1425 ACCTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCATT 1475 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441 || |||| ||| ||||| || ||||| | | ||||| || || || ||||| || || Sbjct 864 TCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTG 923 Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501 ||||| || || |||||||||| || | ||||| | || || ||||| || || Sbjct 924 TCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATA 983 Query 192502 GTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||||||| | ||| || | ||| || ||||| Sbjct 984 GTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984462946345200