Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq283 109 1e-18
seq1343 87.8 4e-12
>seq283
Length=1109
Score = 109 bits (120), Expect = 1e-18
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || || |||| | ||| | | |||| ||||| || || ||||||||||| || ||
Sbjct 969 GATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGCTTCCCAGCAAAGATCAACCT 910
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|||||| || || || ||||| ||||| || || |||||| || ||||| || |
Sbjct 909 CTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTCACATTGTCAATGGT 850
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||| || || || || | ||| ||||| || ||||| || || |||| |||||||||
Sbjct 849 ATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAATATCTG 790
Query 192534 CAT 192536
|||
Sbjct 789 CAT 787
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 192327 TACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATC 192386
||| || || | ||| | ||| || || || ||||| | || || || |||| ||
Sbjct 768 TACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCCAAGGTACGACCATCCTC 709
Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446
| || |||||||||||||| | ||||| ||||| ||||| || || || ||||| ||
Sbjct 708 AAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTTATCCTG 649
Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506
||||| || ||||| || | |||||| || ||||| || ||||| || ||
Sbjct 648 AATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACTTCAAGGGTAATTGTCTT 589
Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | || || | ||| ||||||||
Sbjct 588 CCCTGTGAGAGTCTTGACAAAAATCTGCAT 559
>seq1343
Length=2062
Score = 87.8 bits (96), Expect = 4e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | |||||||| || || || | ||| | ||| || |||||| || ||
Sbjct 1245 ATACCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCG 1304
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || || |||| |||||||| |||||||| || || | | |||||| || ||
Sbjct 1305 CTCAGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGC 1364
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || || || || || || || || || | || || | |||
Sbjct 1365 GGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCG 1424
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| || || || |||||||||||||| | ||||| | || |||||||||
Sbjct 1425 ACCTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCATT 1475
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441
|| |||| ||| ||||| || ||||| | | ||||| || || || ||||| || ||
Sbjct 864 TCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTG 923
Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501
||||| || || |||||||||| || | ||||| | || || ||||| || ||
Sbjct 924 TCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGATA 983
Query 192502 GTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||||||| | ||| || | ||| || |||||
Sbjct 984 GTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984462946345200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |