Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq283 105 1e-17
seq1343 93.3 8e-14
>seq283
Length=1109
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||||| || ||||| || | || || || || |||||| || |||
Sbjct 560 ATGCCACCACGAAGTCTTAGCACTAAGTGAAGTGTTGCTTCCTTCTGAATATTGTAGTCT 501
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| |||| || | || || | ||||| ||||||||||||| ||||||||||| ||
Sbjct 500 GCCAAAGTCCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGA 441
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || ||||| || || || || |||
Sbjct 440 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGCTTTCC 381
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || || ||||| || || ||||| | || |||| || |||||||||
Sbjct 380 ACCTCAAGGGTAATAGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATT 330
Score = 100 bits (110), Expect = 5e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||| || || |||||||| || || ||||||||||| || || ||||| |||||
Sbjct 941 TCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTG 882
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| || |||||| || ||||| || ||||| || || || || | ||| |||
Sbjct 881 TCCTGGATTTTAGCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATG 822
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| || || |||| |||||||||||
Sbjct 821 GTCTTTCCAGTCAAGGTCTTAACAAATATCTGCAT 787
>seq1343
Length=2062
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| || | ||| |||| || || || | ||| | ||| || ||||| || ||
Sbjct 1245 ATACCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCG 1304
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || || | || |||||||| |||||||| ||||| | | ||||||||| ||
Sbjct 1305 CTCAGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGC 1364
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || || || || || || || || || || || || | |||
Sbjct 1365 GGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCG 1424
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || || || |||||||||||||| | ||||| | ||| |||||||||
Sbjct 1425 ACCTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCATT 1475
Score = 89.7 bits (98), Expect = 9e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972
|||| |||| ||| ||||| || || || | | |||||||| || || ||||| || |
Sbjct 862 CGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCT 921
Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032
| ||||| || || |||||||||| || || ||||| | || || ||||| || |
Sbjct 922 TGTCTTGGATCTTCGATTTTACATTATCGATGGTGTCTGAGGCCTCGACCTCTAGGGTGA 981
Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
| ||||||||||| | ||| || | || || |||||
Sbjct 982 TAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905120703201600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |