Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq743 131 5e-25 seq598 131 5e-25 seq503 131 5e-25 >seq743 Length=49346 Score = 131 bits (144), Expect = 5e-25 Identities = 180/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 ||||||||| || ||||||||| | || || ||||| |||||||| ||||| |||| Sbjct 19482 ACGACGCTGGATGTAACCAGTTTCGGCGGTCTTGACAGCGGTATCAATCAGACCTTCACG 19423 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTC 302711 |||| |||| || |||||||| | ||| ||| | || | || | ||| | || Sbjct 19422 ACCAGCCATGGCGTGGAAGAAGAATTCTGAGGGTGTCAAACCACGAAGGTATGAGTTTTC 19363 Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771 ||||||||||| | |||||| || | ||| |||||| ||||| ||||| | ||||| Sbjct 19362 GACGAAACCACGAGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGCAGCGACCTGTA 19303 Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCAT 302831 || | ||| | || ||||||||||| ||||| || || || | | | |||| Sbjct 19302 CTTGAAACCGAAGGGAATACGCTTTCCTTCAACTGATTGTTGACCGACGACAGCGGTCAT 19243 Query 302832 CTGCGAAATATT 302843 ||||||||| || Sbjct 19242 CTGCGAAATGTT 19231 >seq598 Length=20695 Score = 131 bits (144), Expect = 5e-25 Identities = 180/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 ||||||||| || ||||||||| | || || ||||| |||||||| ||||| |||| Sbjct 11434 ACGACGCTGGATGTAACCAGTTTCGGCGGTCTTGACAGCGGTATCAATCAGACCTTCACG 11375 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTC 302711 |||| |||| || |||||||| | ||| ||| | || | || | ||| | || Sbjct 11374 ACCAGCCATGGCGTGGAAGAAGAATTCTGAGGGTGTCAAACCACGAAGGTATGAGTTTTC 11315 Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771 ||||||||||| | |||||| || | ||| |||||| ||||| ||||| | ||||| Sbjct 11314 GACGAAACCACGAGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGCAGCGACCTGTA 11255 Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCAT 302831 || | ||| | || ||||||||||| ||||| || || || | | | |||| Sbjct 11254 CTTGAAACCGAAGGGAATACGCTTTCCTTCAACTGATTGTTGACCGACGACAGCGGTCAT 11195 Query 302832 CTGCGAAATATT 302843 ||||||||| || Sbjct 11194 CTGCGAAATGTT 11183 >seq503 Length=27307 Score = 131 bits (144), Expect = 5e-25 Identities = 180/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 ||||||||| || ||||||||| | || || ||||| |||||||| ||||| |||| Sbjct 16933 ACGACGCTGGATGTAACCAGTTTCGGCGGTCTTGACAGCGGTATCAATCAGACCTTCACG 16874 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTC 302711 |||| |||| || |||||||| | ||| ||| | || | || | ||| | || Sbjct 16873 ACCAGCCATGGCGTGGAAGAAGAATTCTGAGGGTGTCAAACCACGAAGGTATGAGTTTTC 16814 Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771 ||||||||||| | |||||| || | ||| |||||| ||||| ||||| | ||||| Sbjct 16813 GACGAAACCACGAGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGCAGCGACCTGTA 16754 Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCAT 302831 || | ||| | || ||||||||||| ||||| || || || | | | |||| Sbjct 16753 CTTGAAACCGAAGGGAATACGCTTTCCTTCAACTGATTGTTGACCGACGACAGCGGTCAT 16694 Query 302832 CTGCGAAATATT 302843 ||||||||| || Sbjct 16693 CTGCGAAATGTT 16682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471792104439624