Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq283 86.0 5e-12
>seq283
Length=1109
Score = 86.0 bits (94), Expect = 5e-12
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CG-GAGC-CT 110329
|||||||| || || |||||| |||| ||||| ||||| ||| | || || |||| ||
Sbjct 103 ATGCAAATCTTCGTGAAAACTCTAACTGGCAAGACCATCACCCTTGAGGTCGAGAGCTCT 162
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| ||| | | | || || ||||| ||||| || || | ||| |||
Sbjct 163 GAC---ACTATTGATAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGAC 219
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || || | |||| ||| || || ||||| ||||||| | | || | || ||||||
Sbjct 220 CAGCAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTAC 279
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||||||||||| || | ||| | ||| | || ||| |||| ||||
Sbjct 280 AACATTCAAAAAGAGAGCACTCTTCACTTAGTGCTCAGGCTGAGAGGAGGAA 331
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331
||||| || |||||||| ||| | || || || || |||||| | ||| ||| || |
Sbjct 559 ATGCAGATTTTTGTCAAGACTCTCACAGGGAAGACAATTACCCTTGAAGTTGAGAGCTCA 618
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||| | | | | || || || ||| || || || ||| | || ||||||
Sbjct 619 -GATACCATTGACAATGTCAAGGCAAAAATTCAGGATAAGGAGGGCATCCCACCGGATCA 677
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || || || | ||| ||||| ||||| ||||||| | || |||| ||||||||
Sbjct 678 GCAGAGGCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACCTTGGCAGATTACAA 737
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481
|||||| || || || || ||||| ||||
Sbjct 738 CATTCAGAAGGAGTCGACTCTGCACTTGGT 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412834797402536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |