Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq410 132 8e-25 seq688 123 4e-22 >seq410 Length=70703 Score = 132 bits (146), Expect = 8e-25 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | |||||||| ||||||||| | ||||||||| | || ||||| | || Sbjct 315 CTCTTCGAGATCATCCTCGCTGCCAACTACATGGACATCAAGGCTCTTCTCGACGTCGGC 374 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 ||||||||||| || ||| | ||||||||||||||||| ||||| || || |||||||| Sbjct 375 TGCAAGACCGTCGCAAACATGATCAAGGGCAAGTCGCCTGAGGAGATTCGTAAGACCTTC 434 Query 2035749 AACATCAAGTACG 2035761 |||||| || ||| Sbjct 435 AACATCCAGAACG 447 >seq688 Length=51025 Score = 123 bits (136), Expect = 4e-22 Identities = 276/412 (67%), Gaps = 2/412 (0%) Strand=Plus/Minus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || |||||||||||| || || | | ||||| ||| || | || ||||| || Sbjct 5486 GATGGCAACATGCCCCACGTCATCATCTCGGGCATGCCTGGTATCGGAAAGACAACCTCG 5427 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCT-CTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACT 2019121 ||| ||| |||||| | | |||||| | ||| | | || ||||| |||||| | Sbjct 5426 ATCCTGTGTCTGGCGAGACAATTGCTTGGG-GATGCCTACAAGGAAGCCGTCCTCGAATT 5368 Query 2019122 CAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTC 2019181 || || |||||||||||||| | || ||||| || | |||||| |||| Sbjct 5367 GAACGCCTCAGACGAGCGCGGTATCGATGTCGTCCGCAACCGTATCAAGGGCTTCGCTCA 5308 Query 2019182 GAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTG 2019241 ||||| | || ||||| |||||||||| ||| || |||| |||||||| |||||| | Sbjct 5307 GAAAAAAGTCACACTGCCCGCCGGCCGCCAAAAGCTGGTCATTCTCGATGAAGCCGACAG 5248 Query 2019242 CCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGAC 2019301 | | || || | ||||| || ||| | || |||||||||| ||| ||| ||| || Sbjct 5247 CATGACATCCGGCGCCCAACAAGCCTTGAGAAGAACCATGGAAATCTACTCCAGCACAAC 5188 Query 2019302 GCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTG 2019361 || || || | || || ||| ||| | | |||| ||| | || || ||||| Sbjct 5187 TCGCTTCGCCTTCGCTTGTAACCAGTCCAACAAGATCATTGAACCTCTACAATCTCGTTG 5128 Query 2019362 CGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTG 2019413 ||||| | | | | || || |||||||| || || | ||||||| Sbjct 5127 TGCCATTCTCAGATACTCACGTCTGACCGACGCTCAAATTGTGAAGCGTCTG 5076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916102581593528