Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq283 159 3e-34 seq1343 114 1e-20 seq568 86.0 5e-12 >seq283 Length=1109 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| | ||||| || ||||| ||| |||||||||||||| ||||| || Sbjct 330 TCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGC 271 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || |||||| ||| || || || ||||||||| | ||||| || ||||| ||||| || Sbjct 270 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 211 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||| ||||| || | || |||||| | || | ||||||||| || || Sbjct 210 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGAC 151 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || |||||||||| ||||| || || || ||||| Sbjct 150 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | ||| ||||| || || || || || || |||||||| ||||| || Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| || || || || |||||| | |||| || ||||||||||| || Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| || || || |||||||| |||||| | || | || || || || || Sbjct 665 ATGCCCTCCTTATCCTG-AATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAAC 607 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || || || || || | || || ||||| |||||||| Sbjct 606 TTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| ||||| || || || ||||| || || || | || | ||| || | || Sbjct 989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGC 930 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| | ||||| || || || || || || || ||||||||||| || | ||| Sbjct 929 TTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTA 870 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| | || | || || || || || || | ||| || || || ||||| Sbjct 869 GCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTC 810 Query 29764 AAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||||||||||||||| Sbjct 809 AAGGTCTTAACAAATATCTGCAT 787 >seq1343 Length=2062 Score = 114 bits (126), Expect = 1e-20 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATC 29633 ||||| | |||||| || ||||||||||| ||||| || || | ||| ||||||| || Sbjct 351 AGCACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAA-GGTGCGACCCTC 409 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 |||||||| || || || | || | | || || || || || |||||||| ||||| Sbjct 410 CTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTC 469 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 ||| ||| |||| ||||| | || | ||||| || || ||||| || || || | Sbjct 470 TTG-AATCTTTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGG 528 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || ||||| ||||| |||||||| Sbjct 529 TCTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 562 >seq568 Length=22718 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || |||||||| || || ||||| || || || ||||||| Sbjct 8361 ACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACC 8302 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| || ||||||||| | || | | ||||||||||| ||||| || || || Sbjct 8301 GTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTT 8242 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||||| | || | ||||| || || || ||||| || || Sbjct 8241 GTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGGGTGAT 8182 Query 29751 AGTTTTGCCAGT 29762 || ||||| || Sbjct 8181 GGTCTTGCCGGT 8170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385212852550632