Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq283 159 3e-34
seq1343 114 1e-20
seq568 86.0 5e-12
>seq283
Length=1109
Score = 159 bits (176), Expect = 3e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
|||||| |||| | ||||| || ||||| ||| |||||||||||||| ||||| ||
Sbjct 330 TCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGC 271
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| |||||| ||| || || || ||||||||| | ||||| || ||||| ||||| ||
Sbjct 270 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 211
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||||||| ||||| || | || |||||| | || | ||||||||| || ||
Sbjct 210 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGAC 151
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || |||||||||| ||||| || || || |||||
Sbjct 150 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| | ||| ||||| || || || || || || |||||||| ||||| ||
Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| ||| ||| || || || || |||||| | |||| || ||||||||||| ||
Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| || || || |||||||| |||||| | || | || || || || ||
Sbjct 665 ATGCCCTCCTTATCCTG-AATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAAC 607
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||| || || || || || || | || || ||||| ||||||||
Sbjct 606 TTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
||||| ||||| || || || ||||| || || || | || | ||| || | ||
Sbjct 989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCATCCTCCAACTGC 930
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| |||||| | ||||| || || || || || || || ||||||||||| || | |||
Sbjct 929 TTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATTTTA 870
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
|| ||| | || | || || || || || || | ||| || || || |||||
Sbjct 869 GCCTTCACATTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTC 810
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
||||| |||||||||||||||||
Sbjct 809 AAGGTCTTAACAAATATCTGCAT 787
>seq1343
Length=2062
Score = 114 bits (126), Expect = 1e-20
Identities = 157/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATC 29633
||||| | |||||| || ||||||||||| ||||| || || | ||| ||||||| ||
Sbjct 351 AGCACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAA-GGTGCGACCCTC 409
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|||||||| || || || | || | | || || || || || |||||||| |||||
Sbjct 410 CTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTC 469
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
||| ||| |||| ||||| | || | ||||| || || ||||| || || || |
Sbjct 470 TTG-AATCTTTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGG 528
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || ||||| ||||| ||||||||
Sbjct 529 TCTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 562
>seq568
Length=22718
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || |||||||| || || ||||| || || || |||||||
Sbjct 8361 ACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACC 8302
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| ||||| || ||||||||| | || | | ||||||||||| ||||| || || ||
Sbjct 8301 GTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTT 8242
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|||||| | || ||||| | || | ||||| || || || ||||| || ||
Sbjct 8241 GTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGGGTGAT 8182
Query 29751 AGTTTTGCCAGT 29762
|| ||||| ||
Sbjct 8181 GGTCTTGCCGGT 8170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385212852550632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |