Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq283 152 1e-31 seq1343 147 4e-30 seq568 95.1 2e-14 >seq283 Length=1109 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| ||||| | ||| || ||||||||||| || || ||||| || || ||||| | Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||| || || || || || ||||||||||| || || || ||||| || || Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || |||||||| ||||| ||||| || ||||| ||||| ||||| | || | || || Sbjct 665 ATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATC-TGAGCTCTCAAC 607 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | || || ||||| ||||| | ||||| ||||| |||||||| Sbjct 606 TTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559 Score = 125 bits (138), Expect = 1e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| || || || |||| || | || || Sbjct 1001 CGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCA 942 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || | || || ||||||||||| | || ||||| ||||| || ||||| || || Sbjct 941 TCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTG 882 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || || || || || || ||||| ||||| ||||| || | || || |||||||| || Sbjct 881 TCCTGGATTTTAGCCTTCACATTGTCAATGGTATCGG-AGCTCTCCACCTCCAAAGTGAT 823 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| |||||||||||||| Sbjct 822 GGTCTTTCCAGTCAAGGTCTTAACAAATATCTGCAT 787 >seq1343 Length=2062 Score = 147 bits (162), Expect = 4e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | ||| || || ||||| || || ||||| || || ||||| || ||| Sbjct 1018 TACCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCAC 1077 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | |||||| || | ||| || ||||||||||| || | |||||| ||||||| Sbjct 1078 TGAGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAG 1137 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCT 82760 | ||||| ||||| || |||||||| | || ||||| ||||| || || | ||| || Sbjct 1138 GAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTC-TGAGGCCTCG 1196 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||||||||| | || || ||||| |||||||| Sbjct 1197 ACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 Score = 100 bits (110), Expect = 6e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || |||||||| || || || || || | | | ||| || || ||||| Sbjct 360 TGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCCTCCTCGAGTTGC 419 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || ||||| || | ||||| || || || || || ||||| |||||||||||| Sbjct 420 TTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCTTT 479 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || || || ||||| || || | || ||||| | || || ||||| || ||| Sbjct 480 GACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGTC 539 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || || || ||||| |||||||| Sbjct 540 AAAGTTTTGACAAAAATCTGCAT 562 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| | | ||||| || || || || || || || ||||| || || || || Sbjct 107 ACCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCT 166 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | ||||| || || || || || || ||||| || | ||||| |||||||| Sbjct 167 CAAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGG 226 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||||||||||| || || ||||| | || || || || || || || || || || Sbjct 227 AATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGAC 286 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || ||||| || || | ||||| ||||| || ||||| Sbjct 287 CTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 >seq568 Length=22718 Score = 95.1 bits (104), Expect = 2e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| ||||| ||||| ||||| || || || || Sbjct 8374 TACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGC 8315 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | |||||| || || || || ||||||||||| || | || ||||| |||| Sbjct 8314 TAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAG 8255 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || |||||||| ||||| ||| ||||| || || || ||||| || || | || Sbjct 8254 GAATGCCTTCCTTGTCTTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCG 8196 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || | || || |||||||| || Sbjct 8195 ACCTCAAGGGTGATGGTCTTGCCGGT 8170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981810192298328