Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq283 152 1e-31
seq1343 147 4e-30
seq568 95.1 2e-14
>seq283
Length=1109
Score = 152 bits (168), Expect = 1e-31
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| ||||| | ||| || ||||||||||| || || ||||| || || ||||| |
Sbjct 785 CCTCCCCTCAACCTCAGTACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCC 726
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | ||| || || || || || ||||||||||| || || || ||||| || ||
Sbjct 725 AAGGTACGACCATCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 666
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| || |||||||| ||||| ||||| || ||||| ||||| ||||| | || | || ||
Sbjct 665 ATGCCCTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATGGTATC-TGAGCTCTCAAC 607
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| | || || ||||| ||||| | ||||| ||||| ||||||||
Sbjct 606 TTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTGACAAAAATCTGCAT 559
Score = 125 bits (138), Expect = 1e-23
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || |||| || | || ||
Sbjct 1001 CGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTCCTTCCA 942
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | || || ||||||||||| | || ||||| ||||| || ||||| || ||
Sbjct 941 TCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCCTCTTTG 882
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|| || || || || || ||||| ||||| ||||| || | || || |||||||| ||
Sbjct 881 TCCTGGATTTTAGCCTTCACATTGTCAATGGTATCGG-AGCTCTCCACCTCCAAAGTGAT 823
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||||||||||||
Sbjct 822 GGTCTTTCCAGTCAAGGTCTTAACAAATATCTGCAT 787
>seq1343
Length=2062
Score = 147 bits (162), Expect = 4e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| | | ||| || || ||||| || || ||||| || || ||||| || |||
Sbjct 1018 TACCTCCACGTAGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCAC 1077
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | |||||| || | ||| || ||||||||||| || | |||||| |||||||
Sbjct 1078 TGAGAGTGCGACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAG 1137
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCT 82760
| ||||| ||||| || |||||||| | || ||||| ||||| || || | ||| ||
Sbjct 1138 GAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATAGTGTC-TGAGGCCTCG 1196
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || || ||||||||||| | || || ||||| ||||||||
Sbjct 1197 ACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCAT 1246
Score = 100 bits (110), Expect = 6e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| || || |||||||| || || || || || | | | ||| || || |||||
Sbjct 360 TGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCCTCCTCGAGTTGC 419
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
||||| || ||||| || | ||||| || || || || || ||||| ||||||||||||
Sbjct 420 TTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCTTT 479
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
| || || || ||||| || || | || ||||| | || || ||||| || |||
Sbjct 480 GACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGTC 539
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
|| || || ||||| ||||||||
Sbjct 540 AAAGTTTTGACAAAAATCTGCAT 562
Score = 91.5 bits (100), Expect = 3e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
|||||| | | ||||| || || || || || || || ||||| || || || ||
Sbjct 107 ACCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCT 166
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | | ||||| || || || || || || ||||| || | ||||| ||||||||
Sbjct 167 CAAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGG 226
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
||||||||||| || || ||||| | || || || || || || || || || ||
Sbjct 227 AATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGAC 286
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||| || ||||| || || | ||||| ||||| || |||||
Sbjct 287 CTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334
>seq568
Length=22718
Score = 95.1 bits (104), Expect = 2e-14
Identities = 146/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | ||| ||||| ||||| ||||| || || || ||
Sbjct 8374 TACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGC 8315
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | |||||| || || || || ||||||||||| || | || ||||| ||||
Sbjct 8314 TAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAG 8255
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || |||||||| ||||| ||| ||||| || || || ||||| || || | ||
Sbjct 8254 GAATGCCTTCCTTGTCTTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCG 8196
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| || | || || |||||||| ||
Sbjct 8195 ACCTCAAGGGTGATGGTCTTGCCGGT 8170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981810192298328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |