Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1343 143 3e-29 seq568 122 8e-23 seq283 111 2e-19 >seq1343 Length=2062 Score = 143 bits (158), Expect = 3e-29 Identities = 157/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || ||||| || || ||||| |||| || ||| ||| |||||||| | Sbjct 359 ATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCC-TCCTCGAGTT 417 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | ||||| ||||| |||||||| ||||| || |||||||| |||| Sbjct 418 GCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCT 477 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||||| | |||| ||||| | || |||||| |||| ||||| ||| || || | Sbjct 478 TTGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAG 537 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||| |||||| || |||||||||||| Sbjct 538 TCAAAGTTTTGACAAAAATCTGCATG 563 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| || || || |||||||||| || ||| |||||| | || Sbjct 1727 ATGCAGGGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCCAATTG 1786 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || ||||||| ||||||||||| || |||||||| |||||||| |||||| Sbjct 1787 CTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT 1846 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | ||||| | || | ||||| | || ||| || || | |||| ||| || || || Sbjct 1847 TGACTTGACATTGTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTTACCAGT 1906 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||| || |||||| Sbjct 1907 TAGGGTCTTGACGAAGATTTGCATG 1931 Score = 118 bits (130), Expect = 1e-21 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||| ||||| ||||| || ||||| |||| || || ||| |||||| | Sbjct 129 AAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGT--ACGGCCGTCCTCAA 186 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| ||| | || || ||||| ||||| ||||| || ||||||||||| || Sbjct 187 GCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCCTGGA 246 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | || | ||||||| | ||| || || | |||| || || | Sbjct 247 TCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATAGTCTTAC 306 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| || || ||||| ||||| Sbjct 307 CCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| || | | ||| ||| | || ||||| Sbjct 585 AAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACTGAGAGTGCGACCA-TCTTCGAG 643 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || | ||||| ||||| || |||||||| |||||||| ||| Sbjct 644 CTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCCTCCTTGTCCTGGAT 703 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||||| | || | |||||| | | |||||| |||| || | || || || Sbjct 704 TTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCACTTCGAGAGTAATAGTCTTACC 763 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||||||||| Sbjct 764 GGTCAAGGTCTTGACGAAAATCTGCAT 790 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || |||| ||| || || || || |||||||| || | | ||| ||| |||||| | Sbjct 1041 AAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACC-GTCCTCCAA 1099 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || | || || || || ||||| ||||| || || |||||||| || Sbjct 1100 TTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGAAT 1159 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| ||||| | || ||| || |||| ||||| ||| ||||| Sbjct 1160 CTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTGCC 1219 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| || ||||||||||| Sbjct 1220 TGTGAGGGTTTTCACAAAAATCTGCAT 1246 >seq568 Length=22718 Score = 122 bits (134), Expect = 8e-23 Identities = 133/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| |||| | ||| ||| |||||||||||||||||| Sbjct 8342 GTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACC-GTCCTCGAGCTGCTTGCC 8284 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| |||||||| || ||||| |||||||||||||| |||||| ||| Sbjct 8283 AGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTT 8224 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | |||| ||||||| | ||| || || | ||||| ||| |||||||| Sbjct 8223 GACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 8170 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| ||| | || | | | ||||| ||||||||||| Sbjct 8570 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCA-TCCTCAAGCTGCTTGCC 8512 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 8511 AGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTT 8452 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || || | |||| ||| |||||||| || || Sbjct 8451 GACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGT 8392 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 8391 CTTGACGAAGATCTGCAT 8374 Score = 104 bits (114), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| ||||| ||||| || ||||| || | ||| |||| |||||| | Sbjct 8807 AAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGT--ACGACCGTCCTCCA 8750 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||| || ||| | || || ||||||||||| || ||||| || |||||||| || Sbjct 8749 ACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGA 8690 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | || | ||||| | | ||||| || | |||| ||| || | Sbjct 8689 TCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTTC 8630 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| |||||||| Sbjct 8629 CAGTAAGAGTCTTGACGAAGATCTGCAT 8602 >seq283 Length=1109 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 |||||| || || |||||||| | | ||| | | | ||||| ||||||||||| || Sbjct 294 CTCTTTTTGAATGTTGTAATCAGCAAGGGTGCGGCCA-TCCTCAAGCTGCTTGCCAGCAA 236 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| | || ||||||||| || || || || |||||||| |||||| ||||| | Sbjct 235 AAATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACAT 176 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | | ||| || || | ||||| ||| ||||| || |||||||| | Sbjct 175 TATCAATAGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCA 116 Query 133648 CGAAAATCTGCAT 133660 |||| || ||||| Sbjct 115 CGAAGATTTGCAT 103 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| ||| || ||| | ||||| |||||||| || Sbjct 755 GTCGACTCCTTCTGAATGTTGTAATCTGCCAAGGTACGACCA-TCCTCAAGCTGCTTACC 697 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 || | || |||| |||||| || || |||||||| ||||| || ||| |||||| | Sbjct 696 AGCAAAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTTATCC-TGAATTTTTGCCT 638 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || || | | ||| || || | ||| | || || || || |||| Sbjct 637 TGACATTGTCAATGGTATCTGAGCTCTCAACTTCAAGGGTAATTGTCTTCCCTGTGAGAG 578 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || |||||||||||| Sbjct 577 TCTTGACAAAAATCTGCATG 558 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 || ||||| |||||||| || ||| || | | | ||||| ||||| || || || | Sbjct 521 TCCTTCTGAATATTGTAGTCTGCCAAAGTCCGGCCA-TCCTCAAGCTGTTTCCCAGCAAA 463 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| |||| ||| ||||| ||||| || ||||||||||| |||||| ||||| | Sbjct 462 AATTAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 403 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| ||||| | | ||||| || | ||| | || || || || || || || || Sbjct 402 GTCAATGGTGTCAGAGCTTTCCACCTCAAGGGTAATAGTCTTTCCAGTGAGGGTCTTAAC 343 Query 133649 GAAAATCTGCAT 133660 ||||||||||| Sbjct 342 AAAAATCTGCAT 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483412630188480