Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1343 105 4e-18 seq568 100 2e-16 seq283 91.5 1e-13 >seq1343 Length=2062 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||||| ||||| || |||||| ||| || || || ||||| ||| || ||||| | Sbjct 1259 ACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACC 1318 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||||||| || || || ||||| | |||||| || ||| |||| | ||| || || Sbjct 1319 ATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGGATACCCTCCTT 1378 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || || | || | || | |||||| | ||| || |||| |||| Sbjct 1379 GTCCTGAATCTT-TGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGACCTCAAGGGTGA 1437 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||||| || | ||||| || ||||||||||| Sbjct 1438 TGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || ||| ||| ||||| |||||||||||| Sbjct 791 ACCACCACGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCT 850 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||| ||| || ||||| || |||| ||| || || ||| | || Sbjct 851 CAGGGTGCGGCCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGG 910 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || ||| | || |||| || | |||||| | || | Sbjct 911 AATTCCCTCCTTGTCTTGGATCTTC-GATTTTACATTATCGATGGTGTCTGAGGCCTCGA 969 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| |||||||| || | || || |||||||| |||||| Sbjct 970 CCTCTAGGGTGATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCATA 1019 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| ||||| |||||||||||| || ||||| |||| |||||||| || || ||||| Sbjct 1739 CTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCCTCCAATTGCTTGCCAGCAAA 1798 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||||||||| ||| |||| | || || ||||| || || || | |||| Sbjct 1799 AATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT-TGACTTGACAT 1857 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| | || || |||| ||||| || ||||| |||| || || | Sbjct 1858 TGTCGATGGTGTCCGAGGCCTCGACCTCAAGAGTGATGGTCTTACCAGTTAGGGTCTTGA 1917 Query 33737 CAAAGATCTGCAT 33749 | ||||| ||||| Sbjct 1918 CGAAGATTTGCAT 1930 Score = 87.8 bits (96), Expect = 1e-12 Identities = 166/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | | ||| | |||||| || || || ||| || || ||| Sbjct 552 AAAATCTGCATGCCACCGCGTAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATG 611 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || ||| ||||| | || || | || ||||||||||| ||||||||||| Sbjct 612 TTGTAGTCACTGAGAGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGT 671 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | || || ||||| |||||| | | |||| ||| | ||||| Sbjct 672 TGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTTTC-GACTTGACATTGTCGATCGTGTC 730 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || | || || || ||||| || || || || || || |||||||| Sbjct 731 CGAAGCCTCCACTTCGAGAGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 Query 33750 A 33750 | Sbjct 791 A 791 >seq568 Length=22718 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || || || ||| || || |||||||| || ||||| || || |||| || Sbjct 8811 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTC 8752 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||| || |||||||| || |||| |||||||| || | || | ||| || ||||| Sbjct 8751 CAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 8692 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || ||| || | | | ||| | |||||| ||||||||| || | ||||| || | Sbjct 8691 GATCTTCGACTTGA-CGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCT 8633 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | || || || |||||||||||| Sbjct 8632 TTCCAGTAAGAGTCTTGACGAAGATCTGCATA 8601 >seq283 Length=1109 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/243 (70%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||||| | | ||| || || ||||||||||||||||| ||| Sbjct 341 AAAATCTGCATTCCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATG 282 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | || ||||| | || || | || || || ||||||||||| | |||| Sbjct 281 TTGTAATCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGC 222 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||| || ||||| || || | | |||| || | ||||| Sbjct 221 TGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTT-GGCCTTGACATTATCAATAGTGTC 163 Query 33690 ---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 ||| || || |||| ||||| || || || |||| ||||| || ||||| || Sbjct 162 AGAGCT---CTCGACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTG 106 Query 33747 CAT 33749 ||| Sbjct 105 CAT 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328698583779840