Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 109 5e-19
seq283 86.0 6e-12
>seq1343
Length=2062
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| |||||||| | | ||||||| || || |||||||||||||||| ||||||
Sbjct 120 CGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 179
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || ||||| || |||| |||| ||||||||||| |||||||| || ||||| ||
Sbjct 180 TCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTG 239
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || || | | || | || |||| | ||| || || | || |
Sbjct 240 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATA 299
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| ||||| || ||||| || | ||||| |||||
Sbjct 300 GTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334
Score = 109 bits (120), Expect = 5e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||| | | |||| |||||||| |||||||||||||||| ||| || || ||||| ||
Sbjct 359 ATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCCTCCTCGAGTTG 418
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
|| |||| |||| ||||||||||| || || || || || || || || ||| ||
Sbjct 419 CTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCTT 478
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
| || | | || | || || | | ||||||||||| || | || || |||||
Sbjct 479 TGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGT 538
Query 132100 CAGAGTTTTTATGAAAATCTGCATG 132124
|| |||||| | ||||||||||||
Sbjct 539 CAAAGTTTTGACAAAAATCTGCATG 563
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | ||||||| || || ||||||||||| || | || || |||||||
Sbjct 582 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACTGAGAGTGCGACCATCTTCG 641
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| || |||| | |||| | ||||||||| ||||| || ||||| || || ||
Sbjct 642 AGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 701
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
||||| || | | || | || || | | ||||||||||| || | || |||
Sbjct 702 ATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCACTTCGAGAGTAATAGTCTTA 761
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| |||| || || | ||||||||||||
Sbjct 762 CCGGTCAAGGTCTTGACGAAAATCTGCAT 790
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| |||| | |||| || |||||||| |||||||| || | || || || ||
Sbjct 1038 ACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCC 1097
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| || ||||| | | |||| ||||| ||||| |||||||| || || || || || |
Sbjct 1098 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGA 1157
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || |||| | || | ||| || | | ||| || |||| || | || ||
Sbjct 1158 ATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTG 1217
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| | |||||||||||
Sbjct 1218 CCTGTGAGGGTTTTCACAAAAATCTGCAT 1246
>seq283
Length=1109
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || ||||||||||| || || |||||| ||| || ||||| ||||| | |
Sbjct 752 GACTCCTTCTGAATGTTGTAATCTGCCAAGGTACGACCATCCTCAAGCTGCTTACCAGCA 693
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| || || ||||| || ||||| ||||||| || |
Sbjct 692 AAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGAATTTTTGCCTTGACA 633
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | ||| ||||| | || | || || || || ||||| ||
Sbjct 632 TTGTCAATGGTATCTGAGCTCTCAACTTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTG 573
Query 132110 ATGAAAATCTGCATG 132124
| ||||||||||||
Sbjct 572 ACAAAAATCTGCATG 558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476603145270720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |