Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1343 109 5e-19 seq283 86.0 6e-12 >seq1343 Length=2062 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||||||| | | ||||||| || || |||||||||||||||| |||||| Sbjct 120 CGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 179 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || |||| |||| ||||||||||| |||||||| || ||||| || Sbjct 180 TCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTTG 239 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | || |||| | ||| || || | || | Sbjct 240 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGATA 299 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||| || ||||| || | ||||| ||||| Sbjct 300 GTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||| | | |||| |||||||| |||||||||||||||| ||| || || ||||| || Sbjct 359 ATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAGGTGCGACCCTCCTCGAGTTG 418 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 || |||| |||| ||||||||||| || || || || || || || || ||| || Sbjct 419 CTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCTTGAATCTT 478 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 | || | | || | || || | | ||||||||||| || | || || ||||| Sbjct 479 TGACTTGACGTTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGT 538 Query 132100 CAGAGTTTTTATGAAAATCTGCATG 132124 || |||||| | |||||||||||| Sbjct 539 CAAAGTTTTGACAAAAATCTGCATG 563 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | ||||||| || || ||||||||||| || | || || ||||||| Sbjct 582 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACTGAGAGTGCGACCATCTTCG 641 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| | ||||||||| ||||| || ||||| || || || Sbjct 642 AGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 701 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | || || | | ||||||||||| || | || ||| Sbjct 702 ATTTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCACTTCGAGAGTAATAGTCTTA 761 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| || || | |||||||||||| Sbjct 762 CCGGTCAAGGTCTTGACGAAAATCTGCAT 790 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| |||| | |||| || |||||||| |||||||| || | || || || || Sbjct 1038 ACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTGCGACCGTCCTCC 1097 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | || ||||| | | |||| ||||| ||||| |||||||| || || || || || | Sbjct 1098 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCCTGA 1157 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | ||| || | | ||| || |||| || | || || Sbjct 1158 ATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGGGTGATGGTCTTG 1217 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||||||||||| Sbjct 1218 CCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 >seq283 Length=1109 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| || || |||||| ||| || ||||| ||||| | | Sbjct 752 GACTCCTTCTGAATGTTGTAATCTGCCAAGGTACGACCATCCTCAAGCTGCTTACCAGCA 693 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| || || ||||| || ||||| ||||||| || | Sbjct 692 AAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGAATTTTTGCCTTGACA 633 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | ||| ||||| | || | || || || || ||||| || Sbjct 632 TTGTCAATGGTATCTGAGCTCTCAACTTCAAGGGTAATTGTCTTCCCTGTGAGAGTCTTG 573 Query 132110 ATGAAAATCTGCATG 132124 | |||||||||||| Sbjct 572 ACAAAAATCTGCATG 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603145270720