Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1343 107 2e-18 >seq1343 Length=2062 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| ||||| || || ||||| | ||||| ||||||| || ||| Sbjct 563 CATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTC 504 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || || ||| ||| || || |||||||| || ||||| || Sbjct 503 GGACACCATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAGGGTATCCCACCCGACCA 444 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || | ||||| | || ||| || |||||||| || | | | | | ||||| ||||| Sbjct 443 ACAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACAA 384 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 || ||||||||||| ||| ||||| | ||| | ||| Sbjct 383 CATCCAAAAAGAATCAACCCTTCATCTCGTGCTTAGA 347 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || ||| | || || ||| | ||||| | || ||||| ||| Sbjct 1018 ATGCAAATCTTTGTCAAGACACTCACTGGTAAAACTATCACCCTAGAGGTCGAGGCCTCA 959 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | |||||| || || || || ||||| || || || || || Sbjct 958 GACACCATCGATAATGTAAAATCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAA 899 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || || | || ||| || ||||| || || | | | | ||||||||||| Sbjct 898 CAACGTCTGATCTTCGCCGGTAAGCAACTGGAGGACGGCCGCACCCTGAGCGATTACAAC 839 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || ||||| || |||||| |||| Sbjct 838 ATCCAAAAGGAGTCCACCCTTCA 816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445086877904640