Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq283 125 4e-24 seq1343 120 2e-22 seq568 84.2 1e-11 seq190 82.4 5e-11 >seq283 Length=1109 Score = 125 bits (138), Expect = 4e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | | ||| || || ||||||||||| ||||||||||| ||||| | | Sbjct 329 CCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCA 270 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || || ||||| || || | ||| |||||||| || Sbjct 269 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGA 210 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || || ||| ||||| |||||| || Sbjct 209 ATACCCTCCTTGTCCTGGATC-TTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCGAC 151 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || || |||| |||||||| || || ||||| Sbjct 150 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCAT 103 Score = 104 bits (114), Expect = 1e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || ||||| |||||| |||||||| ||||||| | || || | || ||| Sbjct 767 ACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCCAAGGTACGACCATCCTCA 708 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||| ||||| || | | ||| || ||||| || | |||||||| || || Sbjct 707 AGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCCGGTGGGATGCCCTCCTTATCC-TG 649 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||||| || || | ||| || ||| |||||| ||||| | ||| || || || Sbjct 648 AATTTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCAACTTCAAGGGTAATTGTCTT 589 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | || || ||||||||||||||| Sbjct 588 CCCTGTGAGAGTCTTGACAAAAATCTGCATG 558 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGT-GCTCTCCTTTTGAATGTTATAATCTG 34537 ||| || | ||| | | ||| || || || || ||| ||||| ||||| || || |||| Sbjct 558 GCCACCACGAAGTCTTAGCACTAAGTGAAGTGTTGCT-TCCTTCTGAATATTGTAGTCTG 500 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || || | || ||||| ||||| || ||||| |||| | ||||||||| || | Sbjct 499 CCAAAGTCCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATTAGCCTCTGTTGGTCTGGAG 440 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCC 34656 | | || ||||||||| |||||| | || || | ||| ||||| ||| ||| Sbjct 439 GAATACCTTCCTTGTCTTGGATCTTG-GACTTGACATTGTCAATGGTGTCAGAGCTTTCC 381 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | ||| || || || || || | || || |||||||||||||| Sbjct 380 ACCTCAAGGGTAATAGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 331 >seq1343 Length=2062 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||||||||| ||||||||| ||||| |||||||| || || Sbjct 1476 CCACCACGAAGACGCAACACCAGATGGAGAGTTGATTCCTTCTGAATGTTGTAGTCACTC 1535 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||| || ||||| ||||| || || || | |||||||||||| || || Sbjct 1536 AGAGTGCGGTTGTCCTCGAGTTGCTTACCAGCGAAAATGAGACGCTGTTGGTCGGGTGGG 1595 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | || ||| | ||| |||||| | |||||| Sbjct 1596 ATACCCTCCTTGTCTTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCTGAGGCCTCCAC 1654 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || || || | || || || || |||||||| Sbjct 1655 CTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 1702 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||| ||||||||| ||||| ||||| || || || Sbjct 801 AGACGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGG 860 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || ||||| |||||||| || || | ||| |||||||| || || | ||||||| Sbjct 861 CCGTCCTCCAGTTGCTTACCGGCGAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCTCC 920 Query 34609 TTGTCTGTGATCTTTTGTTTTA-ACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||||| ||||| | || || |||||| | ||| || || | ||| Sbjct 921 TTGTCTTGGATCTTCGATTTTACATTAT-CGATGGTGTCTGAGGCCTCGACCTCTAGGGT 979 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||||||| || | || || ||||| || ||||| Sbjct 980 GATAGTTTTACCAGTGAGTGTCTTGACAAAGATTTGCAT 1018 Score = 102 bits (112), Expect = 5e-17 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TGAAAGTGTTC 34546 ||||| | |||||| || || || |||||| || ||||| || || ||| |||| | Sbjct 573 AGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCACTGAGAGTG--C 630 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | | ||||| || || || |||||||| || |||||||||||||| || || | |||| Sbjct 631 GACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCCT 690 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 ||||||| ||| ||| | || || | || ||||| ||||||||| | Sbjct 691 CCTTGTCCTGGAT-TTTCGACTTGACATTGTCGATCGTGTCCGAAGCCTCCACTTCGAGA 749 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || |||||||| || || || || ||||||||||| Sbjct 750 GTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 790 Score = 100 bits (110), Expect = 2e-16 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATC--TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAA 34573 || ||||| ||||| || || | || ||| || | || || ||||| || ||||| | Sbjct 372 TCTTTTTGGATGTTGTAGTCGCTCAAGGTG--CGACCCTCCTCGAGTTGCTTTCCGGCGA 429 Query 34574 ATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG 34633 | || | |||||||||||| || || | |||||||||||| ||| |||| || ||| Sbjct 430 AGATGAGACGCTGTTGGTCGGGTGGGATACCCTCCTTGTCT-TGAATCTTTGACTTGACG 488 Query 34634 AT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692 | ||| ||||| | ||||||||| | ||| || || || || || || ||||| Sbjct 489 TTGTCAATGGTGTCCGAGGCCTCCACTTCGAGGGTGATGGTCTTTCCAGTCAAAGTTTTG 548 Query 34693 ACAAAAATCTGCATG 34707 ||||||||||||||| Sbjct 549 ACAAAAATCTGCATG 563 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||||||||||||||| || |||||| || ||||| || || Sbjct 108 CCTCCACGAAGACGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 167 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || |||| ||||| || || ||||| || || | |||||||||||| || || Sbjct 168 AAGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGA 227 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| |||||||| |||| || | || ||| | || ||||| ||| || Sbjct 228 ATTCCTTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGCCTCGAC 286 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||| || | || || |||||||| ||||| Sbjct 287 CTCAAGAGTGATAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334 Score = 98.7 bits (108), Expect = 6e-16 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTGAAAGTGTTC 34546 ||||| | ||||| || || || ||||||||||| || || | |||| |||| | Sbjct 1029 AGACGGAGGACCAAGTGTAGGGTTGATTCCTTTTGAATATTGTAGTCACTGAGAGTG--C 1086 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | |||| || | ||| ||||| ||||| || | ||| |||||||| || || | ||||| Sbjct 1087 GACCGTCCTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCTGGAGGAATTCCCT 1146 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 ||||||| ||| || | || || | ||| |||||| | ||| || || | | Sbjct 1147 CCTTGTC-CTGAATCTTGGACTTCACATTGTCAATAGTGTCTGAGGCCTCGACCTCGAGG 1205 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || | |||||||||||||||||||| Sbjct 1206 GTGATGGTCTTGCCTGTGAGGGTTTTCACAAAAATCTGCAT 1246 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| ||||||||| |||||| || || || || || Sbjct 1248 CCTCCACGAAGACGTAGGACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGCTC 1307 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || | ||| ||||| || || || | |||||||||||| ||||| Sbjct 1308 AGAGTGCGACCATCCTCCAATTGCTTACCAGCGAAAATAAGACGCTGTTGGTCTGGCGGG 1367 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| |||| || ||| | || ||||| | || || Sbjct 1368 ATACCCTCCTTGTC-CTGAATCTTTGACTTGACGTTCTCGATGGTGTCCGAGGCTTCGAC 1426 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || |||||||| || | |||||||| || |||||||| Sbjct 1427 CTCAAGGGTGATGGTTTTACCAGTGAGGGTTTTCACGAAGATCTGCAT 1474 >seq568 Length=22718 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| | | |||||| ||||| || |||||| || ||||| || || || Sbjct 8828 CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 8769 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || | || || ||||| || || | ||||| |||||||| || Sbjct 8768 AGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 8709 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | || |||||| ||||| Sbjct 8708 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCAC 8650 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || || || |||||||| Sbjct 8649 TTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 8602 >seq190 Length=38570 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||||||||||| || ||||| || || || || || || | || || || || Sbjct 36078 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGC 36137 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || || || || | |||||||||||||| || | |||||||||||||| Sbjct 36138 TTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCTGT 36190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314724414043016