Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq283 96.9 2e-15 seq1343 84.2 2e-11 >seq283 Length=1109 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||||||||| ||||| || || || |||| ||||| ||| | Sbjct 103 ATGCAAATCTTCGTGAAAACTCTAACTGGCAAGACCATCACCCTTGAGGTCGAGAGCTCT 162 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | | ||| ||||| || || ||||| || ||| |||| ||| | Sbjct 163 GACACTATTGATAAT--GTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACC 220 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| |||||||| || || || | || || | |||| | | | ||||||| Sbjct 221 AGCAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTACA 280 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 |||| ||||||||||||||| | || || || Sbjct 281 ACATTCAAAAAGAGAGCACTCTTCACTTAGT 311 >seq1343 Length=2062 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || || || || ||||| || || || |||| ||||| | | Sbjct 1930 ATGCAAATCTTCGTCAAGACCCTAACTGGTAAGACCATCACTCTTGAGGTCGAGGCCTCG 1871 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| ||||| ||| || ||||| || || | ||| || | Sbjct 1870 GACACCATCGACAAT--GTCAAGTCAAAGATCCAGGACAAGGAGGGCATCCCGCCAGACC 1813 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | |||||||| || || |||||||| |||| |||| | || |||||||| Sbjct 1812 AGCAGCGTCTCATTTTTGCTGGCAAGCAATTGGAGGACGGCCGCACCCTGAGCGATTACA 1753 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| || ||||| | ||| | || | ||||| || Sbjct 1752 ACATCCAAAAGGAGTCTACCCTGCATCTTGTTCTCCGCCTCCGTGGAGG 1704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355856536277304